foxg1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (52)

Nucleotides (64)

Interactants (228)

XB-GENEPAGE-480075

Gene Symbol: foxg1 Gene Name: forkhead box G1 Synonyms: XBF-1, foxg1b, bf1, XBf1 Add Xenopus synonyms Gene Function: forkhead domain transcription factor Interactants: otx2(29) , en2(22) , egr2(14) , gsc(13) , pax6(12) , rax(12) , chrd(11) View All

XB-GENE-480076

XB-GENE-865339

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001123461\|Xenopus (Silurana) tropicalis forkhead box G1 (foxg1), mRNA GCTTGTTGTGTTTATTTTGAAGGGACATGAAATAGTTTGCTGCATTCTCTCCCCTGGCTCGCACCCTGATTATATTTATATGTATATGTATTTACAGCCCTTTAATTGACGCCAATATTATGTGCGTTTGGTTTTTTGCTTCATGACTTACAAGTGTTTGGAGACGGTGGTGCGACAGAGCTGCTGCTGCGGCTGCTTCCTACTGCTGCGACTTGACTCGAGTGTCCGGCTCCAATCCTTGTGATATTTTGGACATGGGGGATAGGAAGGAAGTTAAAATGATCCCCAAGTCGTCGTTCAGTATCAACAGCCTAGTGCCTGAAGCCGTGCAAAATGACAACCATCCCCAGCCGCACCATCACCACCACCACCACCTGCAACTGCCGCAGCAGTCGCACCATCTGCAGCCCCACCACCGGCCGCTACAGGAGGAGGACGAGCTGGACAAGAGCCTCCTGGAAGTGAAGACAGAGAGCCTCCCCCCGGGTAAGGGAGACCCGGCTGCCTCCGAGCTGCCCGGGGAGGACAAGGAGAAGAGTGAGGACAAGAAGGCGGATGGTGGCGGCGGCAAAGATGGGGAGAATGGGAAGGAAGGGGGCGAGAAGAAGAACGGCAAGTACGAGAAGCCCCCCTTTTCCTACAATGCCCTGATCATGATGGCTATCCGCCAGAGCCCGGAGAAGCGCCTCACCCTCAATGGCATCTACGAGTTCATCATGAAGAACTTCCCCTACTACCGGGAGAACAAGCAGGGCTGGCAGAACTCCATCCGCCACAACCTCAGCCTCAACAAGTGCTTCGTCAAGGTGCCCCGCCACTACGATGACCCCGGCAAGGGCAACTACTGGATGTTGGACCCCAGCAGCGACGATGTGTTCATTGGTGGGACCACTGGGAAACTGCGCAGGAGATCTACCACCTCCAGGGCTAAACTGGCGTTCAAGCGGGGAGCCAGGCTCACCTCCACCGGGCTGACATTTATGGATAGAGCCGGCTCCCTGTACTGGCCTATGTCCCCTTTCCTTTCCTTGCACCACCCCCGGGCCAGCAGCGCCCTCAGCTACAATGGGACCACCTCAGCCTACCCTAGCCACCCCATGCCCTACAGCTCAGTCTTGACTCAGAACTCACTGGGGAGCAACCATTCTTTTTCTACGTCGAATGGCTTGAGCGTAGACAGACTGGTCAACGGAGAGATCCCCTATGCCACCCACCATCTCACTGCAGCCGCCCTGGCTGCCTCGGTGCCATGTGGCCTCCCGGTGCCTTGCTCGGGCACCTACTCCCTTAACCCTTGCTCTGTCAACCTTCTCGCTGGACAAACGGGCTACTTTTTCCCCCATGTACCTCACCCCTCTATAACCTCTCAAAGCAGCACTTCTATGGCAGCCAGGGCGGCTTCCTCTTCCACCTCCCCCCAGGCTCCCTCCACTCTGCCCTGTGAGTCCCTCAGACCTGCCTTGCCAAGCTTCACAACAGGACTCTCAGGAGGACTCTCAGATTATTTCACACATCAAAATCAGGGCTCTTCGTCCAACTCTTTGATACATTAACATCACCCTGGGACAAGACTGTAAGTGAACGTTTTACACACATTTCCATTGTACATGAGAAGTGAAAGGAAAAAAAAAAAAAAAGCAAGCGAACAAAAAAACAAAAAAAAAAAAAAA	Refseq >NM_001085696\|Xenopus laevis forkhead box G1 (foxg1), mRNA GAATTCCGCTGGAATTAAGAATTAATTGTAGCTATAGCTGTCTTACTCTAGATGCACAGAGGGGACGCTTGTTGTGTTTATTTTGAAGGGACATGAAGTAGTTTGCTGCATATATTTTTTTTTCCTCCCCTGATTCTGTTTCTATGTCTCTGCCATCCGCGCAGACCTTTAATTGACGCCGATATTACGCGCGTTCTGTTTTTTGGGTTTTTTTTTGCTTCATGACTTACGAGACAGCGGTGGCGAAAGAGTCTTGCGGCTGCGACTTTGCGACTTGACGCCAGTGTTCCTGCTGCAAAGCCTTGTGATATGTTGGACATGGGGGATAGGAAGGAAGTGAAAATGATTCCCAAGTCATCGTTCAGTATCAACAGCCTAATGCCTGAAGCCGTGCAAAATGACAACCACCCTCAGCCTCACCATCACCATCATCACCAGCAGCAGCCGCAGCATCTCCAGCTGCCCCAGCAGCATCACCTCCAGCCTCACCACCGACCCCTCCAGGAAGAGGACGAGCTGGACAAGAGCCTCCTGGAAGTGAAGACAGAGAGTCTACCCCCGGGCAAGGGGGATCCAGCCGCCTCCGAGCTGCCGGGGGAAGACAAGGACAAGATCGACGATAAGAAAGTGGACGGCAAAGACGGTGACAGCGGCAAAGACGGCGGCGACAAGAAGAACGGCAAATACGAGAAACCCCCGTTCTCTTACAACGCCCTGATCATGATGGCCATCCGCCAGAGCCCGGAGAAACGCCTCACCCTGAACGGCATCTACGAGTTCATCATGAAAAACTTCCCTTACTACCGGGAGAACAAGCAGGGCTGGCAGAACTCCATCCGCCACAACCTCAGCCTCAACAAGTGCTTCGTCAAGGTGCCCCGGCATTACGATGACCCCGGCAAGGGCAACTACTGGATGTTGGACCCGAGCAGCGACGATGTGTTCATTGGCGGCACCACCGGCAAACTGCGCCGGAGATCGACCACCTCCAGGGCTAAGCTGGCGTTTAAACGCGGGGCCAGACTCACCTCCACCGGACTCACCTTTATGGATAGAGCGGGCTCCCTGTACTGGCCCATGTCCCCCTTCCTCTCCTTGCACCACCCAAGGGCCAGCAGCACCCTGAGCTACAATGGGACCACCTCAGCTTACCCCAGCCAACCCATGCCCTACAGCTCAGTCCTGACTCAAAACTCCCTGGGCAACAACCATTCTTTCTCCACGTCCAATGGCCTGAGTGTAGACAGACTGGTCAACGGTGAGATCCCTTATGCCACCCATCATCTTACTGCAGCCGCCCTGGCTGCCTCAGTGCCATGCGGCCTCCCTGTGCCTTGTTCAGGCACCTACTCCTTAAACCCTTGCTCTGTGAACCTTTTGGCTGGACAAACGGGCTACTTTTTCCCCCATGTACCTCACCCCTCTATCACCTCTCAAAGCAGCACTTCTATGGCAGCCAGGGCGGCTTCATCCTCCACCTCCCCCCAGGCTCCCTCCACTCTCCCCTGTGAGTCCCTCAGACCTGCCTTGCCAAGCTTCACTACAGGACTTTCAGGAGGACTCTCCGATTATTTCACACATCAAAATCAGGGCTCCTCGTCCAACTCTTTGATACATTAACATCATGGGA
Protein		Refseq >NP_001116933\|forkhead box G1 [Xenopus (Silurana) tropicalis] MGDRKEVKMIPKSSFSINSLVPEAVQNDNHPQPHHHHHHHLQLPQQSHHLQPHHRPLQEEDELDKSLLEVKTESLPPGKGDPAASELPGEDKEKSEDKKADGGGGKDGENGKEGGEKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKLAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSALSYNGTTSAYPSHPMPYSSVLTQNSLGSNHSFSTSNGLSVDRLVNGEIPYATHHLTAAALAASVPCGLPVPCSGTYSLNPCSVNLLAGQTGYFFPHVPHPSITSQSSTSMAARAASSSTSPQAPSTLPCESLRPALPSFTTGLSGGLSDYFTHQNQGSSSNSLIH	Refseq >NP_001079165\|forkhead box protein G1 [Xenopus laevis] MLDMGDRKEVKMIPKSSFSINSLMPEAVQNDNHPQPHHHHHHQQQPQHLQLPQQHHLQPHHRPLQEEDELDKSLLEVKTESLPPGKGDPAASELPGEDKDKIDDKKVDGKDGDSGKDGGDKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAKLAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAYPSQPMPYSSVLTQNSLGNNHSFSTSNGLSVDRLVNGEIPYATHHLTAAALAASVPCGLPVPCSGTYSLNPCSVNLLAGQTGYFFPHVPHPSITSQSSTSMAARAASSSTSPQAPSTLPCESLRPALPSFTTGLSGGLSDYFTHQNQGSSSNSLIH UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.58803	Xl.416
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		41 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	FOXG1
mouse		MGI	Foxg1	All(5) Targeted, other(3) Targeted, knock Out(1)
zebrafish		ZFIN ZFIN	foxg1a foxg1b	1 Lines(s)

Publications
First:		A posteriorising factor, retinoic acid, reveals that anteroposterior patterning controls the timing of neuronal differentiation in Xenopus neuroectoderm. [Development 1996]
Most recent:		The dual regulator Sufu integrates Hedgehog and Wnt signals in the early Xenopus embryo. [Dev Biol 2013]
		View All Papers 20 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		transcription factor activity
Biological:		regulation of transcription, DNA-dependent
Cellular Component:		nucleus
EC:
KOG:		[K] Transcription factor of the Forkhead/HNF3 family

Reagents		tropicalis	laevis
Clones			EXRC - 1 clone(s)
		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		StrJgi.755.1.S1_at [+] StrJgi.755.1.S1_s_at Str.24891.2.S1_s_at Str.24891.3.S1_at	Xl.416.1.S1_at
Affymetrix 2.0			Xl2.416.1.S1_at

Symbol legend[+]