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Summary Expression Gene Literature (66) GO Terms (11) Nucleotides (112) Proteins (33) Interactants (832) Wiki
XB-GENEPAGE-480475

Gene Symbol: foxa2

Gene Name: forkhead box A2

Synonyms: hnf3b , hnf3beta , hnf3-beta , HNF-3B ( Add Xenopus synonyms , Nomenclature history )

Gene Function: forkhead domain transcription factor

Protein Function :
Acts as a transcriptional activator during early development, limiting the extent of mesoderm formation in the gastrula. Binds to DNA via the target sequence 5'-GT[AC]AACA-3', with 5'-GTAAACA-3' being ...[+]

Interactants: Loading ...
Disease Ontology:

OMIM Diseases:

1/3
 
Xenbase Gene ID XB-GENE-480476 XB-GENE-865381 XB-GENE-17336344
Gene Symbol foxa2 foxa2.L foxa2.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
mRNA RefSeq RefSeq
Protein RefSeq TrEMBL TrEMBL Swiss-Prot RefSeq Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression
Data Mining tropicalis laevis.L laevis.S
XenMine foxa2 foxa2.L foxa2.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards FOXA2 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Foxa2 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR foxa2 ZFIN Ensembl
chicken
GEISHA FOXA2 Ensembl
fruit fly
worm
WORMBASE
Publications
First Sequential expression of HNF-3 beta and HNF-3 alpha by embryonic organizing centers: the dorsal lip/node, notochord and floor plate., Mech Dev 1993                  
Most Recent Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Cell Rep 2019                            
All View All Papers 12 paper(s) referencing morpholinos 4 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 11 terms 0 term 0 term
PANTHER foxa2
KEGG Pathways K08035 K08035
KOG [K] Forkhead/HNF-3-related transcription factor (alt_id KOG:3563)
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Dharmacon Dharmacon Dharmacon
Antibody Foxa2 Ab1 Foxa2 Ab1 Foxa2 Ab1
Affymetrix 1.0 Str.8107.1.S1_at
Affymetrix 2.0 Xl2.55736.1.S1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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