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Summary Expression Gene Literature (30) GO Terms (3) Nucleotides (97) Proteins (28) Interactants (707) Wiki
XB-GENEPAGE-480736

Gene Symbol: hoxa1

Gene Name: homeobox A1

Synonyms: xhox.lab2 , Xhox.lab , xhoxa1 , bsas , hox1f , hoxa1-a , hoxa1-b ( Add Xenopus synonyms , Nomenclature history )

Gene Function: homeodomain transcription factor

Protein Function :

Interactants: Loading ...
Disease Ontology: Athabaskan brainstem dysgenesis syndrome

OMIM Diseases: ATHABASKAN BRAINSTEM DYSGENESIS SYNDROME; ABDS

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Xenbase Gene ID XB-GENE-480737 XB-GENE-480741 XB-GENE-6252179
Gene Symbol hoxa1 hoxa1.L hoxa1.S
Chromosome Chr06 chr6L chr6S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA RefSeq RefSeq NCBI Nucleotide
Protein RefSeq TrEMBL RefSeq TrEMBL NCBI Protein TrEMBL Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression
Data Mining tropicalis laevis.L laevis.S
XenMine hoxa1 hoxa1.L hoxa1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards HOXA1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Hoxa1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR hoxa1a ZFIN Ensembl
chicken
GEISHA HOXA1 Ensembl
fruit fly
worm
WORMBASE
Publications
First Retinoic acid perturbs the expression of Xhox.lab genes and alters mesodermal determination in Xenopus laevis., Genes Dev 1991  
Most Recent De novo transcription of multiple Hox cluster genes takes place simultaneously in early Xenopus tropicalis embryos., Biol Open 2019                                    
All View All Papers 5 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 3 terms 3 terms 3 terms
PANTHER hoxa1
KEGG Pathways K09301 K09301 K09301
KOG [R] Transcription factor zerknullt and related HOX domain proteins
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Dharmacon Dharmacon Dharmacon
Morpholino hoxa1 MO1 , hoxa1 MO2 hoxa1 MO1 , hoxa1 MO2 hoxa1 MO1 , hoxa1 MO2
ORF hoxa1 ORF1 hoxa1.L ORF1
Affymetrix 1.0 Str.9055.1.S1_at [+] Xl.23512.1.S1_at Xl.283.1.S1_at [+]
Affymetrix 2.0 Xl2.23512.1.S1_at Xl2.283.1.S1_at

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.11.3


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