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Summary Expression Gene Literature (50) GO Terms (11) Nucleotides (200) Proteins (41) Interactants (409) Wiki
Gene Symbol:

Gene Name:
SRY-box 13

Sry , sox12 , xSox12 , xsox13 ( Add synonyms , Nomenclature history )

Gene Function:
HMG-box transcription factor

Protein Function :
Transcription factor that binds to DNA at the consensus sequence 5'-AACAAT-3'.

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External Links:
Xenbase Gene ID XB-GENE-481889 XB-GENE-17340252 XB-GENE-865496
Gene Symbol sox13 sox13.L sox13.S
Chromosome Chr02 chr2S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2
CDS Gene model Gene model
Entrez Gene 549758
mRNA RefSeq RefSeq
Protein RefSeq Swiss-Prot RefSeq Swiss-Prot Swiss-Prot
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine sox13 sox13.L sox13.S
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
HGNC AGR, OMIM:Gene, GeneCards SOX13 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
MGI, AGR Sox13 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
RGD, AGR Sox13 Ensembl
sox13 Ensembl
GEISHA SOX13 Ensembl
fruit fly
First Blastoderm-specific and read-through transcription of the sry alpha gene transformed into the Drosophila genome., Dev Biol 1986  
Most Recent De Novo SOX4 Variants Cause a Neurodevelopmental Disease Associated with Mild Dysmorphism., Am J Hum Genet 2019  
All View All Papers 9 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 11 terms 0 term 3 terms
KEGG Pathways K09269 K09269
KOG [K] HMG-box transcription factor SOX5
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks sox13
Morpholinos sox13 MO1 sox13 MO1 sox13 MO1
Clones Horizon Source BioScience Horizon Source BioScience

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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