sia1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

My Xenbase
[Login] [Register]

Search

Summary

Gene Literature (136)

Nucleotides (45)

Interactants (325)

XB-GENEPAGE-482367

Gene Symbol: sia1 [provisional] Gene Name: siamois homeodomain 1 [provisional] Synonyms: Xsia, Siamois, sia Add Xenopus synonyms Gene Function: homeodomain transcription factor Interactants: nodal3.1(58) , wnt8a(43) , chrd(38) , gsc(38) , t(28) , nodal(26) , cer1(25) View All	1/3

XB-GENE-482368

XB-GENE-864865

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001097352\|Xenopus (Silurana) tropicalis siamois homeodomain 1 (sia1), mRNA CCCGGGGAGACAGACATGACCTGTGAGGCTGAAATGGAGCAGATTGTCTCCACTGCGCTGACTCTGCAAGAGGACTACATCAAATTCACCCCAAGGAACCCCACCATGGCCTGCCACACTGAAATCATTGGGGTATTTCATGATATTCACCCCACTGTGGAGAAAAACAAGGAAGCCCACCGGGATAAATTGGTTCTACAAGAGACTCTGGTGGAACTCTACTCCGTCTTGGGAATTCCACAGGAGCCCCAGGTCGGCAAAACCATGAAGTTTGAAGAACCAGAACAACATAGAGGATCAGCTAGGTTTGACCCCCTAGTCAACAGCCTGCAGTTGAAAAGGCCTTTATACGAGGAGGAACGGAGGGAATGTAAGAGGCCGCTGGTTCAGGCAGATGAGGCCGTGGCAGCCCCCAGTGCCAGATCCAGGAGGAGAACCATTTACTCCAAGGAGCAAACCCACTTCCTTCAGAATCAATTTGACCTCAACCCTTATCCGGACTTTGTCAACAGATGCCGCATTGCCAAGATAACCGCCATTCCTGAGCCCCGGATACAGGTTTGGTTCCAGAACAGAAGAGCCAGACACCTCCCAAGAGCGGCCACGTCCCTGTCCCCCCAGGAAAGGAAACCCCCGGGTTCTGTAGGGCCCAGATCTTCCCTGTGCAGAGAAGCCCAACACCCAGAAGCTTGGAGTGAAGTTCTGATCCCATCGGACTCACAGCCCCACCCAAACTGACTTCTACAATCAACTCAATGGCTTTTGTACTTCAATGGACTTTTATTATGGGGGGGTTTCTTATAAATAACTTTACTGGCTGCCGATTGGTGCATATGTTACAGGGGATGCTGACATTTATTTTCTATATTTTAGTATTTTATTTATTTTAATATCTTATAGTAATAGACCCCGTTATTTATAGACATTATATTCTGTTCATTCTGTGCTTCATTATTATCTAAAGTTGTATTATTTATGGTTTTTTTAATTATTTGCCTTCTGCTTCTGCCACTTTCCAGCTTTCAAATGGGGGTCGCTGACCCCGGCAGCCAAACCCTATTGCTCTGTGAGGCTCCAGTTTTATTGTTATTGTTACTTTTTATACCTTTATTTTTCAACTTAGGCCCTTTCCTGTTTATATATCGGCCTCTCGTGCAAACCACTCCCTGGTTGCTAAGGTAATTTGCTTCCTAGCAACCAGATAGCAGCTGAAACTCCATTCACTGAATAAAAAGTGAAATAACTAAAACACTACAAATAATAAAAACTAGTCAGATATTCACTTTCACACAGCAGACTGTTGCCAGTTGATTGGTTGCTATGGGTTACTAGACTTCCATATATTTTAGATTTTTTTCTGTATCCACACAGGGCATTGCTTGAAACTGCAGATGTGGCACAATTATGTATTTAGCAATACAAGAAGATTAATATATAGTTGGACGTTTGGTTTTCAATAAAGATGAGATGTTATTTATAAAAAAAAAAAAAAAAAA	Refseq >NM_001085836\|Xenopus laevis siamois homeodomain 1 (sia1), mRNA TTGGGAGACAGACATGACCTATGAGGCTGAAATGGAGCAAATTGTCTCTACCGCACTGACTCTGCAAGATGACTACATCAAATTCACTCCAAGGAACCAAAACATGGCCTGCCACGCTGAAATTATTGGGATATTCCATGATATTCATCCAACTGTGGAAATTAAGGAACCCCACCAGGATAAATCTGTCCTACAAGAGACTCTGGTAGAACTTTACTCTGTTTTGGGAATTCCACAGGAGCCTCAGGTCAGCAAAACCATGAAGTTTGAAGAACCAGAACAACATAAAGAATCATCATCTACTGTCACAAGATCTGACTCCCTAGTCAACAGTCTGCAGTCAACAGGACTTAAAAGGCCATTTTGTGAAGATGAACATAGAGAATATAAGAAACCACTGATTCAGGCAGAGGATATTTCTCCAGCCACCAGTACCAGATCTAGGAAGAGAACCATTTATTCAAAGGAACAAACCAACTTTCTCCAGAACCAATTTGATCTCAACCCTTATCCAGACTTTGTGAACAGATGCCGTATTGCAAAGATAACTGGCATTCCTGAGCCCAGGATACAGGTTTGGTTTCAGAACAGAAGAGCCAGACATCTGCCAAGAGCAACCACTTTCCACTCTCCCCAGGGAAGGAAATCCCCAACTTCAGAAGGACCTAGATCTTTCCTCAGTAGAGAAGCCCATTACCCAGATGAGTGGGGTCAAGCTCCGAACCCTTCAAATACACAGCCCTACCCAAACTGACTTCTTGAATCACCACACTGACTTGTACTTCAGTAGACTTTTAGTTTTTTAAGGTGGTTTCCAATATACATTCAACTGGCCTGAAAAATTGACCTCATTGGAGAAGACTTTGAATGCAAGCAACGTT
Protein		Refseq >NP_001090821\|homeobox protein siamois [Xenopus (Silurana) tropicalis] MTCEAEMEQIVSTALTLQEDYIKFTPRNPTMACHTEIIGVFHDIHPTVEKNKEAHRDKLVLQETLVELYSVLGIPQEPQVGKTMKFEEPEQHRGSARFDPLVNSLQLKRPLYEEERRECKRPLVQADEAVAAPSARSRRRTIYSKEQTHFLQNQFDLNPYPDFVNRCRIAKITAIPEPRIQVWFQNRRARHLPRAATSLSPQERKPPGSVGPRSSLCREAQHPEAWSEVLIPSDSQPHPN UniProtKB	Refseq >NP_001079305\|homeobox protein siamois [Xenopus laevis] MTYEAEMEQIVSTALTLQDDYIKFTPRNQNMACHAEIIGIFHDIHPTVEIKEPHQDKSVLQETLVELYSVLGIPQEPQVSKTMKFEEPEQHKESSSTVTRSDSLVNSLQSTGLKRPFCEDEHREYKKPLIQAEDISPATSTRSRKRTIYSKEQTNFLQNQFDLNPYPDFVNRCRIAKITGIPEPRIQVWFQNRRARHLPRATTFHSPQGRKSPTSEGPRSFLSREAHYPDEWGQAPNPSNTQPYPN UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.52995	Xl.18
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		34 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human
mouse
zebrafish

Publications
First:		Characterization of a functional angiotensin II receptor in Xenopus laevis heart. [Pharmacology 1994]
Most recent:		The dual regulator Sufu integrates Hedgehog and Wnt signals in the early Xenopus embryo. [Dev Biol 2013]
		View All Papers 27 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		DNA binding transcription factor activity
Biological:		regulation of transcription, DNA-dependent
Cellular Component:		nucleus
EC:
KOG:		[K] Transcription factor PRD and related proteins, contain PAX and HOX domains

Reagents		tropicalis	laevis
Clones		EXRC - 1 clone(s)
		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.26882.1.S1_at [+] Str.24453.1.A1_at	Xl.18.1.S1_at
Affymetrix 2.0			Xl2.18.1.S1_at

Symbol legend[+]