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Summary Expression Gene Literature (55) GO Terms (14) Nucleotides (198) Proteins (32) Interactants (1186) Wiki
XB-GENEPAGE-483305
Gene Symbol:
cdx2

Gene Name:
caudal type homeobox 2

Synonyms:
cdx3-like , cdx-2 , cad2 , Xcaudal2 , xcad2 ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :


InterPro :
Collagen , Tumour necrosis fac-like dom , C1q dom , HTH motif [+]

Interactants:
Loading ...

Diseases: 


External Links:
GEO Series :
GSE71006.
1/6
 
Xenbase Gene ID XB-GENE-483306 XB-GENE-864967 XB-GENE-17335658
Gene Symbol cdx2 cdx2.L cdx2.S
Chromosome Chr02 chr2L chr2S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 394817
735025
397753
mRNA RefSeq RefSeq NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. NCBI Protein NCBI Protein  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine cdx2 cdx2.L cdx2.S
Phenotype X. tropicalis X. laevis.L X. laevis.S
Smith Morpholino Screen tneu122o17      
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards CDX2 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Cdx2 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Cdx2 Ensembl
zebrafish
chicken
GEISHA CDX2 Ensembl
fruit fly
worm
Publications
First A novel chicken homeobox-containing gene expressed in neurulating embryos., Biochem Biophys Res Commun 1993  
Most Recent Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Elife 2020                
All View All Papers 10 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 14 terms 4 terms 4 terms
PANTHER cdx2
KEGG Pathways K22234 [+] K09312 [+] K09312 [+]
KOG [K] Transcription factor Caudal, contains HOX domain
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks cdx2
Morpholinos cdx2 MO1 , cdx2 MO2 , cdx2 MO3 cdx2 MO1 , cdx2 MO2 , cdx2 MO3 cdx2 MO1 , cdx2 MO2 , cdx2 MO3
ORFs cdx2 ORF1 cdx2.L ORF1 cdx2.L ORF2
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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