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Summary Expression Gene Literature (74) GO Terms (4) Nucleotides (31) Proteins (15) Interactants (312) Wiki
XB-GENEPAGE- 483330

Gene Symbol: pdx1

Gene Name: pancreatic and duodenal homeobox 1

Synonyms: ipf1 , XlHbox8 , pdx-1 , XlHbox-8 , STF-1
Add Xenopus synonyms , Nomenclature history


Gene Function: homeodomain transcription factor

Protein Function:
Acts together with ptf1a to induce the pancreatic lineage within the endoderm.


Interactants: YYY

OMIM Disease Associations: DIABETES MELLITUS, NONINSULIN-DEPENDENT; NIDDM [+]
 
Xenbase Gene ID XB-GENE-483331 XB-GENE-17343771 XB-GENE-6464311
Gene Symbol pdx1 pdx1.L pdx1.S
Chromosome Chr02 chr2L chr2S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq
Protein NCBI Protein TrEMBL Refseq Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Xl.85737
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 32 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine pdx1 pdx1.L pdx1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards PDX1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Pdx1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN pdx1 ZFIN Ensembl
chicken
GEISHA PDX1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: XlHbox 8: a novel Xenopus homeo protein restricted to a narrow band of endoderm. [Development 1989]
Most recent: The histone methyltransferase Setd7 promotes pancreatic progenitor identity. [Development 2016]
View All Papers 12 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 3 terms 4 terms
EC
PANTHER pdx1
KEGG Pathways K07594 K07594
KOG [R] Transcription factor zerknullt and related HOX domain proteins
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones     EXRC - 1 clone(s)
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience
Antibody Pdx1 Ab1 , Pdx1 Ab2 Pdx1 Ab1 , Pdx1 Ab2
Morpholino pdx1 MO1 pdx1 MO1 pdx1 MO1
Affymetrix 1.0 Str.51687.1.S1_at
Affymetrix 2.0

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