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Summary Expression Gene Literature (44) GO Terms (13) Nucleotides (464) Proteins (38) Interactants (982) Wiki
XB-GENEPAGE-483417
Gene Symbol: sox11

Gene Name: SRY-box 11

Synonyms: xSOX-11 , XLS13 , XLS13b , xsox11 , xls13a , sox11-a , sox11-b ( Add synonyms , Nomenclature history )

Gene Function: HMG-box transcription factor

Protein Function :
Binds to the DNA sequence 5'-AACAAT-3'. Plays a role together with nlk in neural induction during early embryogenesis.

Interactants: Loading ...
Disease Ontology: autosomal dominant non-syndromic intellectual disability 27

OMIM Diseases: MENTAL RETARDATION, AUTOSOMAL DOMINANT 27; MRD27

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Xenbase Gene ID XB-GENE-483418 XB-GENE-6252061 XB-GENE-483422
Gene Symbol sox11 sox11.L sox11.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA RefSeq RefSeq RefSeq
Protein RefSeq Swiss-Prot RefSeq TrEMBL Swiss-Prot RefSeq Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression
Data Mining tropicalis laevis.L laevis.S
XenMine sox11 sox11.L sox11.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SOX11 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Sox11 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR sox11a sox11b ZFIN Ensembl
chicken
GEISHA SOX11 Ensembl
fruit fly
worm
WORMBASE
Publications
First XLS13A and XLS13B: SRY-related genes of Xenopus laevis., Gene 1997  
Most Recent Six1 and Irx1 have reciprocal interactions during cranial placode and otic vesicle formation., Dev Biol 2019  
All View All Papers 9 paper(s) referencing morpholinos 3 paper(s) referencing OMIMs 3 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 10 terms 7 terms 5 terms
PANTHER sox11
KEGG Pathways K09268 K09268 K09268
KOG [K] HMG-box transcription factor
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Dharmacon Dharmacon Dharmacon
Morpholino sox11 MO1 , sox11 MO2 sox11 MO1 , sox11 MO2 sox11 MO1 , sox11 MO2
ORF sox11 ORF1 sox11.S ORF1
Affymetrix 1.0 Str.27246.1.S1_at [+] Xl.891.2.S1_a_at Xl.891.1.S1_at
Affymetrix 2.0 Xl2.891.2.S1_a_at [+] Xl2.891.1.S1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.12.0


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