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XB-GENEPAGE-483417
Gene Symbol:
sox11
Gene Name: SRY-box 11
Synonyms:
xSOX-11
,
XLS13
,
XLS13b
,
xsox11
,
xls13a
,
sox11-a
,
sox11-b
( Gene Function: HMG-box transcription factor Protein Function
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Transcription factor that binds to the DNA sequence 5'-AACAAT-3' (PubMed:9332350). Acts as a transcriptional activator. Plays a role together with nlk in neural induction during early embryogenesis (Pu...[+]
Interactants:
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Diseases: Disease Ontology:
Coffin-Siris syndrome
OMIM:
COFFIN-SIRIS SYNDROME 9; CSS9
External Links:
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Xenbase Gene ID | XB-GENE-483418 | XB-GENE-6252061 | XB-GENE-483422 | |||||
Gene Symbol | sox11 | sox11.L | sox11.S | Chromosome | Chr5 | chr5L | chr5S | |
Molecules | X. tropicalis | X. laevis.L | X. laevis.S | |||||
Genomic Sequence |
Version 10.0
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Version 9.1
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Version 9.1
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CDS |
Gene model
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Gene model
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Gene model
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Entrez Gene |
493415
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100216330
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399440
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mRNA |
RefSeq
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NCBI Nucleotide
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NCBI Nucleotide
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Protein
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Genomic |
X. tropicalis | X. laevis.L | X. laevis.S | |||||
Genome Browser (Click image to open in Genome Browser)
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Genomic Synteny | Genomicus PANTHER | |||||||
Expression | Development Stages | Embryonic Tissues | Adult Tissues | |||||
Summary for |
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More Information |
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Data Mining | X. tropicalis | X. laevis.L | X. laevis.S | |||||
XenMine | sox11 | sox11.L | sox11.S | |||||
Orthology |
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human |
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mouse |
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rat |
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zebrafish |
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chicken |
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fruit fly |
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worm |
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Publications | ||||||||
First |
XLS13A and XLS13B: SRY-related genes of Xenopus laevis., Gene 1997 |
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Most Recent |
Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., EMBO J 2021 ![]() |
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All | View All Papers 9 paper(s) referencing morpholinos 3 paper(s) referencing OMIMs 4 paper(s) referencing Disease Ontology | |||||||
Functional Ontologies | X. tropicalis | X. laevis.L | X. laevis.S | |||||
GO | 16 terms | 8 terms | 6 terms | |||||
PANTHER | sox11 | |||||||
KEGG Pathways | K09268 | K09268 | K09268 | |||||
KOG |
[K] HMG-box transcription factor
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Reagents | X. tropicalis | X. laevis.L | X. laevis.S | |||||
CRISPRscan Tracks | sox11 | |||||||
Morpholinos (on-target & off-target) | sox11 MO1 , sox11 MO2 , Sox11 MO3 | sox11 MO1 , sox11 MO2 , Sox11 MO3 | ||||||
ORFs | sox11 ORF1 | sox11.S ORF1 | ||||||
Clones | Horizon Source BioScience | Horizon Source BioScience | Horizon Source BioScience | |||||
Plasmids | Addgene | Addgene |
Symbol legend:



