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Summary Expression Gene Literature (46) GO Terms (13) Nucleotides (464) Proteins (37) Interactants (986) Wiki
XB-GENEPAGE-483417
Gene Symbol: sox11

Gene Name: SRY-box 11

Synonyms: xSOX-11 , XLS13 , XLS13b , xsox11 , xls13a , sox11-a , sox11-b ( Add synonyms , Nomenclature history )

Gene Function: HMG-box transcription factor

Protein Function :
Binds to the DNA sequence 5'-AACAAT-3'. Plays a role together with nlk in neural induction during early embryogenesis.

Interactants: Loading ...
Diseases:  Disease Ontology: autosomal dominant non-syndromic intellectual disability 27

OMIM: MENTAL RETARDATION, AUTOSOMAL DOMINANT 27; MRD27

External Disease Links: ClinVar, MalaCards, KEGG Disease, DECIPHER
1/5
 
Xenbase Gene ID XB-GENE-483418 XB-GENE-6252061 XB-GENE-483422
Gene Symbol sox11 sox11.L sox11.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 493415
100216330
399440
mRNA RefSeq RefSeq RefSeq
Protein RefSeq Swiss-Prot RefSeq TrEMBL Swiss-Prot RefSeq Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining tropicalis laevis.L laevis.S
XenMine sox11 sox11.L sox11.S
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SOX11 OMIM Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Sox11 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR sox11a sox11b ZFIN Ensembl
chicken
GEISHA SOX11 Ensembl
fruit fly
worm
WORMBASE
Publications
First XLS13A and XLS13B: SRY-related genes of Xenopus laevis., Gene 1997  
Most Recent Six1 proteins with human branchio-oto-renal mutations differentially affect cranial gene expression and otic development., Dis Model Mech 2020                    
All View All Papers 9 paper(s) referencing morpholinos 3 paper(s) referencing OMIMs 4 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 10 terms 7 terms 5 terms
PANTHER sox11
KEGG Pathways K09268 K09268 K09268
KOG [K] HMG-box transcription factor
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks sox11
Morpholinos sox11 MO1 , sox11 MO2 sox11 MO1 , sox11 MO2 sox11 MO1 , sox11 MO2
ORFs sox11 ORF1 sox11.S ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.13.0


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