pax8 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (51)

Nucleotides (52)

Interactants (304)

XB-GENEPAGE-483692

Gene Symbol: pax8 Gene Name: paired box 8 Synonyms: XPax8, XPax-8, pax-8 Add Xenopus synonyms Gene Function: paired box transcription factor Interactants: pax2(24) , lhx1(23) , wt1(12) , myod1(11) , nphs1(7) , pax3(7) , rgn(7) View All	1/6

XB-GENE-483693

XB-GENE-865008

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001079301\|Xenopus (Silurana) tropicalis paired box 8 (pax8), mRNA GTCCTCCAGAGACAAGGTGACATTGGCTGGAAGGAGTCGCACTGTGGATTTACCAGGGACTCGGAGGAAGATGCCCAACAGCAGCATCAGATCAGAGCTCATCACAGAGAGGGGCTGCTCAGGACCTGCCAGCAATCTCAATATAGGTCACGGAGGTTTGAATCAGCTAGGTGGTGCCTTTGTGAATGGGCGACCCCTGCCAGAGGTGGTGAGGCAGCGAATAGTTGACCTGGCACATCAGGGGGTACGTCCCTGTGACATCTCACGACAGCTCCGAGTCAGTCATGGCTGTGTCAGCAAAATTTTGGGCAGGTACTATGAGACAGGCAGTATTCGGCCAGGCGTCATCGGAGGTTCCAAGCCCAAGGTTGCCACCCCCAAAGTGGTGGAGAAAATCGGAGATTACAAACGCCAGAACCCTACAATGTTTGCCTGGGAAATCAGGGACCGGCTGCTGGCAGAGGGGGTGTGCGACAATGACACAGTTCCCAGCGTCAGCTCTATCAACAGAATCATACGCACCAAAGTACAGCAACTTTTTAACCTGCCTATGGAGAGCTGCGTAAAATCACTGAGCCCAGGACAGACTTTAATCCCTAGTTCAGCAGTCACGCCCCCTGAGTCTCCCCATTCAGACTCTCTGGGATCCACGTATTCCATCAGCGGTTTGTTGGGAATCACGCAGCCCGGCGCGGATGGAAAGCGCAAACTTGATGACAGTGACCAGGAGAGCTGCAGGCTCAGCATTGACTCCCAAGGCAGCATGGGGATCAGTAGGAAACAGCTGCGCACCGAGGCATATGGGCACCACCCTCTGGACGCCCTGGAGTGTCACTTCCAGAGACAACATTTCCCAGAGTCCTACTCCTCTTCCACCCACAGCAAAACAGAACAGGCTCTATATACCCTACCCCTGCTCAACAATGCAATGGATGATGGGAAATCTTCACTGACTTCCACAAACACAACAATTGGTAGAAACCTCTCGACCCACCAGGGATACTCTGCTCTATCTGAACTCTCAGCCTTCACCATTAAACAAGAGGCTTCAGACAGCTCCAGCGCTAGCTCCACCCCTTCATCTTTATGTAGCCCCACCTTCCTGGATCTGCAGCCAATCAGCTCAGGATGCTCAGCGCCATCCTTCAGCGCTTTTTCACACCCCGCATCTGTGTACGGCCAGTTCACAAGCCACATGGCCTCAGGTCGTGATGTGGTTGGATCCACGTTGCCAGGGTACCCACCTCACATACCTAGCGGGCAAGGAAATTACGCCTCTTCTGCGATTGCTGGAATGGTAGCTGCAGGAGGTGATTACTCTGGAAATGCCTATAGCCATGGGGCTTATGCAGCCTACGGAGAGAGTTGGCGTTTCCCCAGCTCAAGCCTTCTAGGCTCTCCCTATTACTACAGCTCTGCCACAAGGACTGCACCTCCTCCCACAACGGCAGGAGCCTATGACCTTCTGTAGTCTTCATGGAGACCGTTGAGTAGCATCATCAACAAAGCAACCCGGCCCTGGGAAAGTGGCTTAATGGTGGACAAAACTAACCATGGCAACACATGGTCACAAGTGTTATGAGACAACAAGTAACAAGAACAACATATCAAACATGGACTAAAGTTACCCTTTTAATCTTGGACTTCCTGGAGCTGTGGATGATATTCGGTAACGCAAGAGATGAAACCTCCGAAGAAGATACAAAGAAAAATCACATTCATTGTTTCTGCAAGCCTAACAAGGAATATTTTTTTGTTCTCTCCACAAATGTAGAAAATGTATAGAGCCATGTACAAGGGTGTTACATACATTTATATATTGGGGTATATAACAAAATATTTGCTAGGCATTTCAGCTGCGATGTGTAGTTAGCCTAACAATGTGTAGTTTCTCCTGTTGATCCTAAGGACAATGGTAAAGACGGCCAGGGTCAGACTGGGCTGCCAGAGTACCACAGGATCTCTAAATGGGCCCAGGATGATTCCCTTCAGTCCTTTCTTATTTTCACCATAGGTTTAGCACAGTCTACATGGAATTGCTGTGCGCCCTCCTTGTCAGGTTCTCCTATGTTCCCTAGGTGACCCAATTTGCAAATTCATTGCAACTCTTGCAGCTCTGCAAATGGAGCTTCTTAATCTGTTCTCAAACTTCCAACAACCTGCAGTGGATGCTGGGCAATTTAGTTTAACAACAGATGGAGCAAGAGAACACTGTAGTACAAGGATTTCCAACTGCACTGTTCTGTACATTCAGAGCTGAGCAAGTGCTGGACCTGGCAGGAAACAAACCAACTGCAGCCCATTCGTCCCCTCTCCGTAACATCCCCAAATTAAAATGGTGAAGTAAAACACCAAAAAGAATGTTGGCAGGAAACACTACACATTGTTTAAAGGTAATCACCCTGAACTGCCCTTGATTTACCTTTCTCTGTAACACAAAAAAAAATGAAGTAAGCATTCAGCTGCTCCTCTCATCTGCCCTCTTTGGTTTAAAAGTTTAATAACTGTCCCTTATTTATATGGAGTTGGCTCTGGGGTCTGACAGCAAAAAACTTCCTCCCTATTGGTGGAAGTGCCTTCTGGATAAACGGAGGCAGAAAAGAGTTGTATGAGGTGGGCCCGCAGGCTGCTGTTCTCATCCCAATGCCGTGTTCCGTGGCATGTTTACAAATGCAGCAATATTTTATCCAGTACGAGGAGGGAACATAGAACATAAACCCCCTTACCCTTTCCTCTCACTTAAGAATAAGCAATGCACATATCCATTAATTTAGTAGAGTAACTATAGGATACCTGGCCCCATATCACAATCTTTTTAGGGCCCCTTAAGCTTTGGGAATAAGATACAATATACCACTTTATCAGTTAGTGGCCCACTGGGCCCCCTAAATAAATTGCCATTCAGCATTTGGATTTTATTACTGTCCACTTTTAAAAGAAATAATTTTTTTGAAAGCAGAATTTTCCCAAGGCTGCCCAATGAACACACTCAAAGCATCCCTGCTGGGAAGGGAGTACAAGTTGGGTTTGTAATGCTGCATTTAAGTAAGTGAGGAGGGGAAATGCTGGAGTTGTTGTACTTCCACTCCCTGCACAGCTGCAGGAGCAAAGACTGCACAAATAGACTCAAAACTGTATATAAATATATGTATGTACAAAATATACATCTATGCAGAGCTCTGTCTCTATATATATATACTGTTTTTATAGCCACAAGGGCTGTACCAGTGACTGGAATGCACTAGTTATTCATACTCTTAGTGCCGGTTCACAATCACTCTAGAAATCTGACTTGGAAGAAGATGCAAATCACACAGCGGGGCTAATTTACTAAGATAGGTGCTAAATTGCCCCTGAGTGTAATCACCCATGGCAACCAGCCAACAATTAACTGTGATCTGCCCACTTATGTTAGAAATGAAAGATCTAATTGGTGGTTACTGGGACACGTTAATACCTATGTCAGTGAGTCAGCCCCATGACTGTGTGTTAACCAGTTGGGCCAAAGGCTATGAATTAACTTCATTTTGATTGGGACATCAACCTGCAAGTGTTTCTAATTACTTGTGCCAAGGCATAGACATAAGTTATATTCTGTTTGCCCTTCCTGTTTTCGACGTGGCGGCTCAGTGCACACAAACGCTGGGGAATATAATGCAAGAGGTTACAATGAAGGAAAGACTTAAGATCAGGCATTATTCCAGGATTGTGTCTGCTCCGCACTAAATGACTTTATCACATGGCCCTGTCTGTGGGAATACAGTAACTGCAGGGCCAGACTGTAAATAAATATTTGTAATATAAAATATTTTAAATAAATAAGCATGAAGGAAAAAAAAAAAAAAAAAA	Refseq >NM_001088472\|Xenopus laevis paired box 8 (pax8), mRNA ATGCCCAACAGCAGCATCAGATCAGAGCTGACCACAGAGAGGGGCTTCTCAGGACCTGCCAGCAATTTCAATATAGGTCACGGAGGTTTGAATCAGTTAGGTGGGGCTTTTGTGAATGGACGACCTCTACCAGAGGTGGTGAGGCAGCGGATTGTTGACCTGGCGCACCAGGGGGTACGTCCCTGTGACATCTCACGACAGCTCAGAGTCAGTCATGGCTGTGTCAGCAAAATTTTGGGCAGGTACTATGAGACAGGCAGTATCCGGCCAGGTGTCATTGGAGGTTCCAAGCCCAAGGTTGCCACCCCCAAAGTGGTGGAGAAAATCGGAGATTACAAACGCCAGAACCCAACAATGTTTGCCTGGGAAATCAGGGACCGGCTGCTGACAGACGGGGTGTGCGACAATGACACAGTTCCCAGTGTCAGCTCTATCAACAGAATCATACGCACTAAAGTACAGCAACTTTTTAACCTGCCCATGGAGAGCTGTGTAAAATCTCTGAGCCCAGGACAAACTCTGATCCCTAGTTCAACAGTGACACCCCCTGAGTCTCCCCATTCAGACTCCCTGGGATCCACGTATTCCATCAGTGGTTTGTTGGGGATCACGCAGCCCAGCGCAGATGGAAAGCGCAAACTTGATGACAGTGACCAGGAGAGCTGCAGGCTGAGTATTGACTCTCAAGGCAGTGTGGGGATCAGTAGGAAACAGCTCCGTACGGAGGCTTATGGGCACCACCCTCTAGACGCCCTGGAGTGTCACTTCCAGAGACAACATTTTCCGGAATCCTACTCTTCTTCCACTCACAGCAAAACAGAACAGGCTCTATATACCCTACCCCTGCTCAACATTTCATTGGATGATGGAAAATCATCACTGACTTCCACAAACACCACAATTGGCAGAAACCTCTCGACCCACCAAGGATATTCTGCTTTATCTGAATTCACAGCCTTCTCCATTAAACAAGAGGCTTCAGACAGCTCCAGTGCTAGCTCCACCCCTTCATCTTTATGTAGCCCCACCTTCCTGGATCTGCAGCCAATCAACTCAGGATGCTCAGCGCCATCCTTCAGCGCATTTTCACACCCATCTGTGTATGGCCAGTTCACAAGCCATGTGGCCTCAGGCCGTGATGTAGTTGGAGCCACATTGCCAGGATACCCACCTCACATACCCAGTGGGCAAGGAAATTATGCCTCCTCTGCAATTGCTGGAATGGTAGCTGCAGGAGGTGATTACTCTGCAAATGCCTACAGCCATGGGGCTTATGCAGCATACGGAGACAGTTGGCGCTTCCCCAGCTCCAGCCTTCTAGGCTCTCCCTATTACTACAGCTCTGGCACAAGGACTGCACCTCCTCCCACAACGGCAGGAGCCTATGACCTTATGTAG
Protein		Refseq >NP_001072769\|paired box protein Pax-8 [Xenopus (Silurana) tropicalis] MPNSSIRSELITERGCSGPASNLNIGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQLFNLPMESCVKSLSPGQTLIPSSAVTPPESPHSDSLGSTYSISGLLGITQPGADGKRKLDDSDQESCRLSIDSQGSMGISRKQLRTEAYGHHPLDALECHFQRQHFPESYSSSTHSKTEQALYTLPLLNNAMDDGKSSLTSTNTTIGRNLSTHQGYSALSELSAFTIKQEASDSSSASSTPSSLCSPTFLDLQPISSGCSAPSFSAFSHPASVYGQFTSHMASGRDVVGSTLPGYPPHIPSGQGNYASSAIAGMVAAGGDYSGNAYSHGAYAAYGESWRFPSSSLLGSPYYYSSATRTAPPPTTAGAYDLL UniProtKB	Refseq >NP_001081941\|paired box protein Pax-8 [Xenopus laevis] MPNSSIRSELTTERGFSGPASNFNIGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLTDGVCDNDTVPSVSSINRIIRTKVQQLFNLPMESCVKSLSPGQTLIPSSTVTPPESPHSDSLGSTYSISGLLGITQPSADGKRKLDDSDQESCRLSIDSQGSVGISRKQLRTEAYGHHPLDALECHFQRQHFPESYSSSTHSKTEQALYTLPLLNISLDDGKSSLTSTNTTIGRNLSTHQGYSALSEFTAFSIKQEASDSSSASSTPSSLCSPTFLDLQPINSGCSAPSFSAFSHPSVYGQFTSHVASGRDVVGATLPGYPPHIPSGQGNYASSAIAGMVAAGGDYSANAYSHGAYAAYGDSWRFPSSSLLGSPYYYSSGTRTAPPPTTAGAYDLM UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.51436	Xl.2754
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		103 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	PAX8	OMIM:218700
mouse		MGI	Pax8	All(5) Targeted, knock Out(2) Targeted, other(2)
zebrafish		ZFIN	pax8	2 Lines(s)

Publications
First:		Molecular regulation of pronephric development. [Curr Top Dev Biol 1999]
Most recent:		Comparative Functional Analysis of ZFP36 Genes during Xenopus Development. [PLoS One 2013]
		View All Papers 22 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:
Biological:		multicellular organismal development
Cellular Component:		nucleus
EC:
KOG:		[K] Transcription factor PAX2/5/8, contains PAX domain

Reagents		tropicalis	laevis
Clones		EXRC - 2 clone(s)	EXRC - 1 clone(s)
		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.51436.2.S1_s_at [+] Str.51436.1.A1_at StrEns.1046.1.S1_at	Xl.2754.1.S1_at
Affymetrix 2.0			Xl2.2754.1.S1_at [+] Xl2.2754.1.S2_at

Symbol legend[+]