4.0
|
XB-GENEPAGE-484552
|
Gene Symbol: sox2
Gene Name: SRY-box 2 Synonyms: XLSOX-2, Sox-2, XSox2, Xsox-2, anop3, mcops3 Add Xenopus synonyms , Nomenclature history Gene Function: HMG-box transcription factor Interactants: chrd(99) , t(95) , snai2(91) , otx2(86) , myc(78) , tubb2b(75) , bmp4(73) View All OMIM Disease Associations: MICROPHTHALMIA, SYNDROMIC 3; MCOPS3 |
|
1/6 | Xenbase Gene ID | XB-GENE-484553 | XB-GENE-865099 | XB-GENE-17341038 | ||||||||
| Gene Symbol | sox2 | sox2.L | sox2.S | ||||||||
| Molecules | tropicalis | laevis.L | laevis.S | ||||||||
| Gene | GBrowse 8.0 GBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 | GBrowse 6.0 | |||||||||
|
Entrez Gene
|
Entrez Gene
|
||||||||||
| mRNA |
Refseq
|
Refseq
|
|||||||||
| Protein |
Refseq
UniProtKB
|
Refseq
UniProtKB
|
|||||||||
| Genomic | tropicalis | laevis.L | laevis.S | ||||||||
| Genome Browser |
|
|
|||||||||
| Links |
|
||||||||||
| Genomic Synteny | Genomicus Metazome | ||||||||||
| Expression | tropicalis | laevis.L | laevis.S | ||||||||
| Ensembl | Ensembl | ||||||||||
| UniGene | Str.6201 [+] | Xl.188 | |||||||||
| RNA-seq profile: Owens, Blitz et al. 2016 | sox2 | ||||||||||
| Images | 336 expression image(s) for tropicalis and laevis | ||||||||||
| Data Mining | |||||||||||
| XenMine | sox2 | sox2.L | sox2.S | ||||||||
| Phenotype | tropicalis | laevis.L | laevis.S | ||||||||
| Smith Morpholino Screen | |||||||||||
| Orthology |
|
||||||||||
| human |
|
||||||||||
| mouse |
|
||||||||||
| zebrafish |
|
||||||||||
| chicken |
|
||||||||||
| fruit fly |
|
||||||||||
| worm |
|
||||||||||
| Publications | |||||||||||
| First: |
Neural crest formation in Xenopus laevis: mechanisms of Xslug induction. [Dev Biol 1996]
|
||||||||||
| Most recent: |
Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing. [Dev Biol 2016]
|
||||||||||
| View All Papers 138 paper(s) referencing morpholinos | |||||||||||
| Functional Ontologies | |||||||||||
| GO: Molecular: | DNA binding PANTHER | ||||||||||
| Biological: | regulation of transcription, DNA-dependent PANTHER | ||||||||||
| Cellular Component: | PANTHER | ||||||||||
| EC: | |||||||||||
| KOG: |
[K] HMG-box transcription factor
|
||||||||||
| Reagents | tropicalis | laevis.L | laevis.S | ||||||||
| CRISPR / TALEN | CRISPR tools | CRISPR tools | CRISPR tools | ||||||||
| Clones | EXRC - 2 clone(s) | EXRC - 1 clone(s) | |||||||||
| GE Dharmacon | GE Dharmacon | GE Dharmacon | |||||||||
| geneservice/RZPD imagenes | geneservice/RZPD imagenes | ||||||||||
| Antibody | Sox2 Ab1, Sox2 Ab2, Sox2 Ab3 | Sox2 Ab1, Sox2 Ab3 | |||||||||
| Morpholino | sox2 MO1, sox2 MO2, sox2 MO3, sox2 MO4, sox2 MO5 | sox2 MO1, sox2 MO2, sox2 MO3, sox2 MO4, sox2 MO5 | sox2 MO1, sox2 MO2, sox2 MO3, sox2 MO4, sox2 MO5 | ||||||||
| Affymetrix 1.0 | Str.43967.1.A1_at [+] | Xl.188.1.S1_at [+] | |||||||||
| Affymetrix 2.0 | Xl2.188.1.S1_a_at [+] | ||||||||||
Symbol legend[+]
