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XB-GENEPAGE-484864
Gene Symbol:
sox17b.1
Gene Name: SRY (sex determining region Y)-box 17 beta, gene 1
Synonyms:
Xsox17-beta
,
sox17-beta
,
tSox17beta
,
Sox17beta
,
sox17
,
Xsox17
( Gene Function: HMG-box transcription factor Protein Function
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Transcription activator. Doesn't appear to bind to the consensus 5'-AACAAT-3' DNA binding site, but binds 5'-ATTGTT-3'. All of the sox17 proteins are required for embryonic endoderm development and gas...[+]
Interactants:
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Diseases: Disease Ontology:
vesicoureteral reflux
OMIM:
VESICOURETERAL REFLUX 3; VUR3
External Links:
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Xenbase Gene ID | XB-GENE-484865 | XB-GENE-865510 | XB-GENE-6252148 | |||||
Gene Symbol | sox17b.1 | sox17b.1.L | sox17b.1.S | Chromosome | Chr6 | chr6L | chr6S | |
Molecules | X. tropicalis | X. laevis.L | X. laevis.S | |||||
Genomic Sequence |
Version 10.0
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Version 9.1
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Version 9.1
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CDS |
Gene model
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Gene model
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Gene model
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Entrez Gene |
394440
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100049782
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397967
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mRNA |
RefSeq
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NCBI Nucleotide
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NCBI Nucleotide
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Protein
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Genomic |
X. tropicalis | X. laevis.L | X. laevis.S | |||||
Genome Browser (Click image to open in Genome Browser)
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Genomic Synteny | Genomicus PANTHER | |||||||
Expression | Development Stages | Embryonic Tissues | Adult Tissues | |||||
Summary for |
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More Information |
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Data Mining | X. tropicalis | X. laevis.L | X. laevis.S | |||||
XenMine | sox17b.1 | sox17b.1.L | sox17b.1.S | |||||
Orthology |
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human |
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mouse |
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rat |
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zebrafish |
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chicken |
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fruit fly |
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worm |
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Publications | ||||||||
First |
Mixer, a homeobox gene required for endoderm development., Science 1998 |
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Most Recent |
Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., EMBO J 2021 ![]() |
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All | View All Papers 14 paper(s) referencing morpholinos | |||||||
Functional Ontologies | X. tropicalis | X. laevis.L | X. laevis.S | |||||
GO | 23 terms | 4 terms | 12 terms | |||||
PANTHER | sox17b.1 | |||||||
KEGG Pathways | K04495 | K04495 | K04495 | |||||
KOG |
[K] HMG-box transcription factor
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Reagents | X. tropicalis | X. laevis.L | X. laevis.S | |||||
CRISPRscan Tracks | sox17b.1 | |||||||
Antibodies | Sox17a/b Ab2 , Sox17b Ab1 | Sox17a/b Ab2 , Sox17b Ab1 | Sox17a/b Ab2 , Sox17b Ab1 | |||||
Morpholinos (on-target & off-target) | sox17b.1/b.2 MO1 | sox17a MO3 , sox17b.1/b.2 MO1 | sox17a MO3 , sox17b.1 MO1 | |||||
ORFs | sox17b.1.S ORF1 | |||||||
Clones | EXRC Horizon Source BioScience | Horizon Source BioScience | Horizon Source BioScience | |||||
Plasmids | Addgene | Addgene |
Symbol legend:



