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Summary Expression Gene Literature (48) GO Terms (24) Nucleotides (140) Proteins (39) Interactants (746) Wiki
XB-GENEPAGE-484905
Gene Symbol:
gata5

Gene Name:
GATA binding protein 5

Synonyms:
xGATA-5 , xGATA5 , xGATA-5a , xGATA5a , xGATA-5b , xGATA5b , GATA-5 , gata-4a , gata5-b , gata5-a ( Add synonyms , Nomenclature history )

Gene Function:
zinc finger transcription factor

Protein Function :


InterPro :
ORC6 met/pln , ORC6 , EF hand dom , EF-hand-dom pair [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
familial atrial fibrillation [+]

OMIM:
CONGENITAL HEART DEFECTS, MULTIPLE TYPES, 5; CHTD5

External Links:
1/5
 
Xenbase Gene ID XB-GENE-484906 XB-GENE-6255488 XB-GENE-864887
Gene Symbol gata5 gata5.L gata5.S
Chromosome Chr10 chr9_10L chr9_10S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 496852
379521
398144
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine gata5 gata5.L gata5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards GATA5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Gata5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Gata5 Ensembl
zebrafish
ZFIN, AGR gata5 ZFIN Ensembl
chicken
GEISHA GATA5 Ensembl
fruit fly
worm
Publications
First GATA-4 is a novel transcription factor expressed in endocardium of the developing heart., Development 1993                  
Most Recent Genome-wide transcriptomics analysis of genes regulated by GATA4, 5 and 6 during cardiomyogenesis in Xenopus laevis., Data Brief 2018    
All View All Papers 13 paper(s) referencing morpholinos 2 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 23 terms 8 terms 9 terms
PANTHER gata5
KEGG Pathways K02608 [+] K17896 K17896
KOG [K] GATA-4/5/6 transcription factors
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks gata5
Morpholinos (on-target & off-target) gata5 MO1 , gata5 MO4 gata5 MO1 , gata5 MO2 , gata5 MO4 gata5 MO1 , gata5 MO2 , gata5 MO4 , gata5 MO3
ORFs gata5 ORF1 gata5.L ORF1 gata5.S ORF1
Clones Horizon Source BioScience Horizon Source BioScience EXRC Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info