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Summary Expression Gene Literature (17) GO Terms (7) Nucleotides (2298) Proteins (20) Interactants (554) Wiki
XB-GENEPAGE- 485053

Gene Symbol: h2afz

Gene Name: H2A histone family member Z

Synonyms: H2Az , H2A.z , H2A.Z1
Add Xenopus synonyms , Nomenclature history


Gene Function: chromatin structure

Protein Function:
Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA...[+]


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-485054 XB-GENE-6256368 XB-GENE-17342536
Gene Symbol h2afz h2afz.L h2afz.S
Chromosome scaffold_3 chr1L chr1S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1
Entrez Gene
Entrez Gene
mRNA Refseq Refseq
Protein Refseq Swiss-Prot Refseq Swiss-Prot TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v7.1 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.46996 [+] Xl.42570 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 5 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine h2afz h2afz.L h2afz.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards H2AFZ OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI H2afz MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN h2afva ZFIN Ensembl
chicken
GEISHA H2AFZ Ensembl
fruit fly
worm
WORMBASE
Publications
First: H2A.ZI, a new variant histone expressed during Xenopus early development exhibits several distinct features from the core histone H2A. [Nucleic Acids Res 1996]
Most recent: Genome-wide identification of thyroid hormone receptor targets in the remodeling intestine during Xenopus tropicalis metamorphosis. [Sci Rep 2017]
View All Papers 2 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 5 terms 0 term
EC
PANTHER h2afz
KEGG Pathways K11251 K11251
KOG [B] Histone 2A (alt_id KOG:1757)
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
ORF h2afz ORF1
Affymetrix 1.0 StrJgi.1744.1.S1_at [+] Xl.63.1.S1_s_at [+]
Affymetrix 2.0 Xl2.42570.1.S1_a_at

Symbol legend[+]

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