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Summary Expression Gene Literature (499) GO Terms (10) Nucleotides (273) Proteins (33) Interactants (2361) Wiki
XB-GENEPAGE-485219

Gene Symbol: otx2

Gene Name: orthodenticle homeobox 2

Synonyms: Xotx2 , otx-2 , Xotx-2 , otxA , otx2-a , otx2-b ( Add Xenopus synonyms , Nomenclature history )

Gene Function: homeodomain transcription factor

Protein Function :
May play a central role in the initial events of axis formation and in particular in specifying anterior head regions and their spatial relationship with trunk structures. Activates the head organizer ...[+]

Interactants: Loading ...
Disease Ontology: microphthalmia

OMIM Diseases: MICROPHTHALMIA, SYNDROMIC 5; MCOPS5 [+]

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Xenbase Gene ID XB-GENE-485220 XB-GENE-485224 XB-GENE-6254039
Gene Symbol otx2 otx2.L otx2.S
Chromosome Chr08 chr8L chr8S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq Refseq
Protein Refseq Swiss-Prot Swiss-Prot Refseq Swiss-Prot TrEMBL Swiss-Prot Refseq Swiss-Prot TrEMBL Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine otx2 otx2.L otx2.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tgas114a06      
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards OTX2 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Otx2 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR otx2b otx2a ZFIN Ensembl
chicken
GEISHA OTX2 Ensembl
fruit fly
worm
WORMBASE
Publications
First Neural induction by the secreted polypeptide noggin., Science 1993  
Most Recent Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Cell Rep 2019                            
All View All Papers 135 paper(s) referencing morpholinos 8 paper(s) referencing OMIMs 16 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 9 terms 4 terms 5 terms
PANTHER otx2
KEGG Pathways K18490 K18490 K18490
KOG [K] Homeobox transcription factor
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones EXRC - 2 clone(s)   EXRC - 1 clone(s)
Dharmacon Dharmacon Dharmacon
Antibody Otx2 Ab1 , Otx2 Ab2 , Otx2 Ab3 , Otx2 Ab4 Otx2 Ab1 , Otx2 Ab2 , Otx2 Ab3 , Otx2 Ab4 Otx2 Ab1 , Otx2 Ab2 , Otx2 Ab3 , Otx2 Ab4
Morpholino otx2 MO1 , otx2 MO2 , otx2 MO3 otx2 MO1 , otx2 MO2 , otx2 MO3 otx2 MO1 , otx2 MO2 , otx2 MO3
ORF otx2 ORF1 otx2.L ORF1 otx2.S ORF1
Affymetrix 1.0 Str.10021.1.S1_at [+] Xl.11672.1.A1_at [+] Xl.1268.1.S1_at
Affymetrix 2.0 Xl2.47281.1.S1_at Xl2.3004.1.S1_at

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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