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Summary Expression Gene Literature (43) GO Terms (19) Nucleotides (107) Proteins (38) Interactants (624) Wiki
XB-GENEPAGE-485395
Gene Symbol: cdx1

Gene Name: caudal type homeobox 1

Synonyms: cdx-1 ( Add synonyms , Nomenclature history )

Gene Function: homeodomain transcription factor

Protein Function :
Plays a role in transcriptional regulation. Involved in activated KRAS-mediated transcriptional activation of PRKD1. Binds to the PRKD1 promoter. Could play a role in the terminal differentiation of th...[+]


Interactants: Loading ...
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Xenbase Gene ID XB-GENE-485396 XB-GENE-17339424 XB-GENE-864834
Gene Symbol cdx1 cdx1.L cdx1.S
Chromosome Chr03 chr3L chr3S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene: 395055
Entrez Gene: 108710769
Entrez Gene: 397695
mRNA RefSeq NCBI Nucleotide RefSeq
Protein RefSeq TrEMBL Swiss-Prot NCBI Protein TrEMBL RefSeq Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine cdx1 cdx1.L cdx1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tneu087f10      
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards CDX1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Cdx1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR cdx1a cdx1b ZFIN Ensembl
chicken
GEISHA CDX1 Ensembl
fruit fly
worm
WORMBASE
Publications
First A novel chicken homeobox-containing gene expressed in neurulating embryos., Biochem Biophys Res Commun 1993  
Most Recent Integration of Wnt and FGF signaling in the Xenopus gastrula at TCF and Ets binding sites shows the importance of short-range repression by TCF in patterning the marginal zone., Development 2019  
All View All Papers 9 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 19 terms 4 terms 5 terms
PANTHER cdx1
KEGG Pathways K09312 K09312 K09312
KOG [K] Transcription factor Caudal, contains HOX domain
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Horizon Horizon Horizon
Morpholino cdx1 MO1 , cdx1 MO2 , cdx1 MO3 cdx1 MO1 , cdx1 MO2 , cdx1 MO3 cdx1 MO1 , cdx1 MO2 , cdx1 MO3
Affymetrix 1.0 Str.121.1.S1_at Xl.1358.1.S1_at [+]
Affymetrix 2.0 Xl2.1358.1.S1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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