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Summary Expression Gene Literature (34) GO Terms (13) Nucleotides (103) Proteins (33) Interactants (494) Wiki
XB-GENEPAGE- 485395

Gene Symbol: cdx1

Gene Name: caudal type homeobox 1

Synonyms: cdx-1
Add Xenopus synonyms , Nomenclature history


Gene Function: homeodomain transcription factor

Protein Function:
Plays a role in transcriptional regulation. Involved in activated KRAS-mediated transcriptional activation of PRKD1. Binds to the PRKD1 promoter. Could play a role in the terminal differentiation of th...[+]


Interactants: YYY

OMIM Disease Associations:
1/5
 
Xenbase Gene ID XB-GENE-485396 XB-GENE-17339424 XB-GENE-864834
Gene Symbol cdx1 cdx1.L cdx1.S
Chromosome Chr03 chr3L chr3S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq
Protein Refseq Swiss-Prot TrEMBL Refseq Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.121 Xl.1358
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 20 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine cdx1 cdx1.L cdx1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tneu087f10      
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards CDX1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Cdx1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN ZFIN cdx1a cdx1b ZFIN Ensembl
chicken
GEISHA CDX1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: A novel chicken homeobox-containing gene expressed in neurulating embryos. [Biochem Biophys Res Commun 1993]
Most recent: Evo-engineering and the cellular and molecular origins of the vertebrate spinal cord. [Dev Biol 2017]
View All Papers 8 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 10 terms 4 terms 6 terms
EC
PANTHER cdx1
KEGG Pathways K09312 K09312 K09312
KOG [K] Transcription factor Caudal, contains HOX domain
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones     EXRC - 1 clone(s)
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Morpholino cdx1 MO1 , cdx1 MO2 , cdx1 MO3 cdx1 MO1 , cdx1 MO2 , cdx1 MO3 cdx1 MO1 , cdx1 MO2 , cdx1 MO3
Affymetrix 1.0 Str.121.1.S1_at Xl.1358.1.S1_at [+]
Affymetrix 2.0 Xl2.1358.1.S1_at [+]

Symbol legend[+]

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