Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (196) GO Terms (27) Nucleotides (124) Proteins (46) Interactants (696) Wiki
XB-GENEPAGE-485395
Gene Symbol:
cdx1

Gene Name:
caudal type homeobox 1

Synonyms:
cdx-1 ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :
Plays a role in transcriptional regulation. Involved in activated KRAS-mediated transcriptional activation of PRKD1. Binds to the PRKD1 promoter. Could play a role in the terminal differentiation of th...[+]



Interactants:
Loading ...

Diseases: 


External Links:
GEO Series :
GSE71006.
1/5
 
Xenbase Gene ID XB-GENE-485396 XB-GENE-17339424 XB-GENE-864834
Gene Symbol cdx1 cdx1.L cdx1.S
Chromosome Chr3 chr3L chr3S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 395055
108710769
397695
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot  More.. NCBI Protein TrEMBL RefSeq Swiss-Prot  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine cdx1 cdx1.L cdx1.S
Phenotype X. tropicalis X. laevis.L X. laevis.S
Smith Morpholino Screen tneu087f10      
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards CDX1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Cdx1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Cdx1 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR cdx1a cdx1b ZFIN Ensembl
chicken
GEISHA CDX1 Ensembl
fruit fly
worm
Publications
First A novel chicken homeobox-containing gene expressed in neurulating embryos., Biochem Biophys Res Commun 1993  
Most Recent Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos., Front Physiol 2020            
All View All Papers 9 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 26 terms 6 terms 7 terms
PANTHER cdx1
KEGG Pathways K09312 K09312 K09312
KOG [K] Transcription factor Caudal, contains HOX domain
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks cdx1
Morpholinos cdx1 MO1 , cdx1 MO2 , cdx1 MO3 cdx1 MO1 , cdx1 MO2 , cdx1 MO3 cdx1 MO1 , cdx1 MO2 , cdx1 MO3
Clones Horizon Source BioScience Horizon Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list