mix1 Summary [species: Xenopus laevis and Xenopus tropicalis]

Summary

Expression

Gene Literature (94)

XB-GENEPAGE-485897

Gene Symbol:

mix1

Gene Name:

Mix paired homeobox

Synonyms:

mix.1 , mix.2 , mix2 , tMix ( Add synonyms , Nomenclature history )

Gene Function:

homeodomain transcription factor

Protein Function Downloaded from UniProtKB

May be a transcription factor which play a regulatory role in the development of the embryo.

InterPro

Homeobox CS , Homeobox dom , Homeobox-like sf

Interactants:

Loading ...

Diseases:

External Links:

MalaCards, KEGG Disease, DECIPHER, COSMIC, MARRVEL, GTR, DisGeNET, dbVAR, GHR, gnomAD

1/3

Xenbase Gene ID

XB-GENE-485898

XB-GENE-6254430

XB-GENE-865559

Gene Symbol

mix1

mix1.L

mix1.S

Chromosome

Chr5

chr5L

chr5S

Molecules

X. tropicalis

X. laevis.L

X. laevis.S

Genomic Sequence

Version 10.0

>mix1 10.0 
							CTGAGCCGCACCGGTCACTTTGGGAGCCACAAGCCTTGGGAACCCAGGAAGCAGCCAGTCCCTAGGATGGACTCATTCAGCCAACAACTGGAGGACTTCTACCCTTCTGGCTTCTCCCCCAGCCCATTGGGCTTCAATGAGACAGAGGTCCAGCCATTTGCCATGAAGGACTTCCAGCAACCGCCCAATAGGAGAGGTAAGGGACATTGGCATGGAATTCTCTAATGTGTCTGCTAGACTTCttagtttatatttatacatagaataTTTATTATCTAATTCTTTAGACAGTACAATATGatggtatagcttattgtgtgcccagtcTGTAGTTATACAGTAGGTAggggctgccatagtgtttcccttagacagtacagtatggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgggtaggaagtgccatagtgtttcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccctctctgtatatttgtatttatacatatgggtaggaggtgccatagtgtatcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgggtagggggtgccatagtgtttcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgggtagggggtgccatagtgtttcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgagtagggggtgccatagtgtttcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgggtagggggtgccatagtgtttcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgggtagggggtgccatagtgtttcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgggtagggggtgccatagtgtttcccttagacagtacagtatgggggtacagcttattgtgtgcccagaacattccttctctgtatatttgtatttatacatatgggtagggggtgccatagtgtttcccttagacagtacagtatgggggtacagcttactagCGCACAgaacatttgtgtatatatatatagttacttaCTGGATCATTCTGGAACAATGGTGAGTTCTAGAGTACTTCATGTAGGAAACAGTAACTCTAATGacgtttattattatttatttacagaagTGACTAAGAGCCCAGCAAGGAGTGAGCAGAGCCCGGTACAGAACATCAGAACCAAAGACACAATGGGCTCCAAAGAGACCGACCCAAGAAACCCGGTGCCCGATGCCTCTTTGCTCCCAGCATCTCAGCGCAGGAAAAGAACCTTCTTCACCCAGGCCCAGTTGGATATCCTAGAGCAGTTCTTCCAAACCAACATGTACCCAGACATCCACCACCGGGAGGAGCTAGCGAGGCATATCTACATCCCTGAGTCCCGCATTCAGGTAAGGTCACTATTAATTATTAGCTAACTGTCAGAACCTGTTAAAGGGCAACTTaacccaaaaaaaaacattatttctgtcatttttgAATAATGTATCCCCTCTCTCCATGTACAATTAAAACCTAGGCACTTTACACCCCGCCCATTCTTAAGCACCCACTGGTACAGGCAAAAGGACGGTCCAATTAGGGAGCACTGGCGGGTATAAAGAAGCCCTTTCCTTGTTGGCTTTGCCCCAGATGCActagtattatatataaatattatatgcgGTCACCAAGGGGGGGTGTAATAGTTTAGTCCCATTCTCTCTCCAGTACAAGAAGAGGGATAATTCTCGGAACATAGAAGGAGCCCCCCTTCCTGTATGTTAATGGGTCAAAGCTTGGGGTAATATGTGTTTCATTGTATTGGTCCCCAAATCAATAACTAATGTTATGTATCTCATTGTTCTACAGGTCTGGTTCCAGAACAGAAGAGCCAAGGTCAGACGTCAAGGTGCAAAGGCCACCAAGCCCGTTCTTGCCGGCCATCATTATTCCAGCACCTTCGGGGCTACCAGATCGATGTTTccttcagcccctgcccccaaCAGCTCCTCACACCCAATGGCAACAGCCCGGGCACAGGCTCAGCCTATGAAAGATTCCCAAGCGAATAAGTTCCACCAAAGCCAGGGGTTCCTTCCCTACCCAGACTCATCTTGTGATGTCTCTCGGCAGAGGTTCCTCTTGTCCCAGGCAACACCCGGTACCTACCATCTGCCCCAGACATCATCCAACATCTACAATCAGAATGGGAAACCCCATAACCCTCTGTGGAACCAGCAGCCGCTATATACAGATATGATGGAGAAGGTCTTGGACCTGAGCAGAAGACCTGAGCAGATGCCAGTCCAGCCAATGTACAGCACCCAGACCCACAAGAACACCAAATCAGTGGTCCACGGTTCTACCACTTTAAGCCACCACAGTCACATGAGCCTGTTTGCCAACCAAGATCCATGTAACATGCCAACAACACAGGGCGGAACCTACGGACACGTCTCTCCTATCTCCGATTCCGGGGTCAGCGACACCTCCCCAGAACCAACTTCCGACTGGGAAGAGAACGTCTGTGTGCTCCTCCACCTTTGAGGCAGTTACTGTATCTGAGTTTGGCAATGTTCTGCCATAGACATATTGGATTTGGACTCTGGGGTGGGAATGTATAAGAAGAGTTTTGATTGGCTAAGACACTTACAGACATTGCAATATTTCTTCCAGATCTTCTTTTCTTCTTGTTATGGACTCAGATGGATAAAAATGTTGACAGTTAGTCTATAGATATTCTAGGGGTATCTAGCACATTACCCCAAATCTAACCATTGGGCTGCTATCTTCTGACAATAGGGGGCAGCACCACAGTTTGGGGGACAGAGAACATGGGCAATGGGATAGAGGaattaatatgtatatttatttttgccttttttattagaagatatttatttttttactcctGTTATAGTTCCTTCTATGTAAATAAACTGTATCTGCCCATAcactatatatctatgtatccgTGGGGCAATAAAAACAATGGGATTGTTCTGAC

Version 9.1

>mix1.L 9.1 
							ATGAATGGATTCAGCCAACAACTGGAGGACTTCTACCCTTCTTACTTCTCCCCCAGCCCATTGGGTTTCAGTGAGCCAGAGGTCCAGCCAGTGGCCATGAACTTGGTGCCAACAACACAGAAGGACATCCAGCAGCAGCCCAACAGGAAAGGTAAGAGAGTTGCCATATTGTTCCCTTTAGACAATACAGTATGGGGATATAGCTTATTGTGTGCCCAGAACATTCCTTCTTTGTATATTTGTATTCATACATATGGGTGGATGTGCCATATTGTTTCCATTAGACAGTATAAGAGTATAGCTTATTGTGTGCCCAGAACATTCCTATTCTGTATATTTGTATTTATTCATATGTGTGGATGTGCCATATGGTTTCCATTAGACAGTACAAGGGTATAGCTTATTGTGTGCCCAGAACATTCCTATTCTGTATATTTGTATTTATACATATGGGTAGGAGGGACCATATTGTTTCCATTAGACCGTACAATATGAGGGTATAGCTTACTAGGTGCACATATAGTTTTCATGAATAATGTATTGATCTGATGAGTTGTTATACAGGAAGGAAACTAATTATTTAACTTTATTATGGTTTATTTATAGAAGTCACCAAGATCCCCAGAGCCAGCGAGCAGAGCCCAGTCCAAAATGTCAGGCCCAAAGAGGCCATTAATACCAAAGAGGCTGACTCGAGAAACCCTGAGCCCGACTCCTCTTTGGTTTCAGCATCTCAGCGACGGAAAAGGACCTTCTTTACCCAGGCCCAGCTGGATATCCTAGAGCAGTTCTTCCAAACAAACATGTACCCAGACATCCACCACCGGGAGGAGCTAGCGAGGCACATTTACATCCCTGAGTCCCGTATTCAGGTAAGATCATGGCTCTGGTCCCTGGCAACAGAAGAAATATTTTCTAAGCAATGTTCCAATTAAAGGAGAACTAAACCCCTGAAAACCTTCAACCCCTTCCCTCCAGTGTCCCCCCCCTGCCCTCTTTCTCCCTCCAGAGTACCTTACTTGAAAGAAGTGTCCCTGCATTAACATTGGTATATTCATGCAGAGTAGCACAGCGGAACTCATGGGCACCATCTTCAGTATCTTCTGATCTGTTTCCCTTTGACAAACTTTCTGTAGGCACGAATACCAGACAAAGCTCTGTGTCAACGCTCACTTAAACAAGGAAGATGGGGGTTTAGTTCTCCTTTAAGTACAAATATATCCCCATAGGAAGCACCCATTGGTACAGGCAAAAGGAACTATGCTCTCCTGATGAATACAGAGCTATCTTCATTCATACATTCAGCAGCATGTTTTTATTAAATAAATGTTTTTATTGTATAGATATAAGAATATGCAAGTAACATTGTGTATCACATTCTTCTACAGGTCTGGTTCCAGAACAGAAGAGCAAAGGTCAGACGTCAAGGTGCCAAAGCCACCAAGCCCGCTCTTGCAAGCCATCATTATTCTAGCACCTCTGGGGCTAACAGGGCAGTATTTCCTTCAGCACCTGCCCCTAACAGCTCCTCATACCAAATGACTTCATCCCGGGCACAGGTCCAGCCTCCAAAAGAATACCAACTGAATAAGTTTCACCAAAGCCAGGGATTCCTTTCCTACCCAGACTCATCTAGTGATGTCTCGAGGCAGAGGTTCCTCTTGTCACAGGCAACACCTGGTGTCTACCACCTGCCCCAGGCATCATCCAATGTCTACGATCAGAATGTGAAATCAAATGACCCTCTGTGGGGCCAGCAGCAAGTATATACAAATATGGAGTCGGTCTTGAACCTCAGCAGAAGACCCCAGCAGATGCCAGCTCAGCCAATGTTCATGAACAGCTTCCAGACCAACAAAATCATCAAATCAAAGATGGATACTACCAGCCCTCCGATCCCTGTATCTACCACTTCAAGCCACCACAGTCAGATGAGTTTGTTTGCCGGCCAAGATCCATGTCACATGTCAACAGCACCGGGCGGAACCTATGGACAGATTTCCCCCATCTCAGATTCTGGTGTCAGTGACACCTCCCCAGAGCCAAGTTCAGACTGGGAAGAGAATGTTTCTGTGCTCCTGCATCTTTGAGGCATTGGGGCAGTTATTATACATCTGAGTTTGTAATGCTCACTCTATATTTTGAACTTATATATATATATTTTGAATATATATTTTGAACTTATTGATGGACTATGAATGGAGTGAAAAGAATTTTGATAGGATATGGTACAGATGTTATAATTCAGATATTCCCATATTGGGTGTCTATAGATATTCTAGGAGTATCTAGATTAGAACAGCACCCCCAAGTTTAACCCTTAGGCTGTTTGCCCCATCCACTACTGTGACACCCAACGGGGGTAACACCACAGTTTGGGGACTATTCTTAATTATAGCAATACAGAGATGTGTGCAATGGGTTTGAGGGATTAATGTACATATATTTAGCCTTTTTATTAGAAGATTTATTTTTTTAATACTGTTATAGTTATACCATTGTATATAAAATGTATCTGCCTGTAACATATCTGTCTATCAGTGGTGCAATAAAGA

Version 9.1

>mix1.S 9.1 
							GCAGCACTGGTCACTTTGGGAGCTGCAAACTTTGGAGTCCAGACAGCATTTCGTCCTTAGGATGGATGGATTCAGCCAACAACTGGAGGACCTCTACCCTTCTTGCTTTTCCCCCTGCCCCAGCCCTTTGGGGTTCAGTGAGCCAGTGATTCAGCCATTTGCCATGAATCTGGCGCCTGCAGCACAGAAGGACTTCCAGCAGCATCCCAATAGGAGAGGTAAGAGACACTGCTCAGAATATTCTTATTTGTCATTTTGGGGCACATTTACTTAAGGtcgatattcgactgtcgaagttaaatccttcgacttcgaatatcgaagtcgaaggatttagcactatttgttcgattcgaaggattttaatccatcgatcgaacgatttttgattgaccaaaaaaagatagctaagcctatggggaccttccccataggctaacatcgacttcggtagcttttaggtggcaaactagggttgtcgaagttttttcttaaagagacagtacttcgactatcgaatggtcgaatagtcgaacgatttcgaagtcatagttgaaggtcgacttagcgcattcgatggtcgaagtagccaaaaaaacattcgaaattcaaagtttttttttctctattccttcactcgagctaagtaaatggaccccctagacttctaATTTGTATAtctgtatatccatacttatacatataggagatgaaatattgttaccctaagttggtacagttttgatgtatattttactaggtgcccagaacattccttattttccttagaaagtacagtataagagaacatcttactaggtgcccagagctttccttgtttccattagaccgtacattatgagtgtaaagcttgctaggtgcacagaaTTTTTGTATTTATACAGTACATATAGTTACTTAATAGAGCATTTACAATAATGTATTGTGGTTCATAAAGTTCATAGAGTTCATAAAGAAAACCAAAATTAAATAACTTTATTATGATTTATTTATAGAAGTCACCAAGATCCCTGGAGCCGGTGAGCAGAGCCCAGTCCAAAATGTCAGACCCAAAGACGCAATTAATCCCAAAGAGGCTGACCCAAGAAGCCCAACGGCTGATGCCTCTTTGGTCCCAGCATCTCAGCGCAGGAAAAGGACCTTCTTCACCCAGGCACAACTGGATATCCTCGAGCAGTTCTTCCAAACCAACATGTACCCAGACATCCACCACCGAGAGGAGCTAGCGAGGCACATCTATATCCCAGAGTCCCGCATTCAGGTAATAGCACGGTTCTGGTTACTATTAGCATATTTTCAGAGCCCCCTAACTAATCAATATAGAAAAGTTGACTATTGGGATTTTTTTGGGGGGGGAAACTGTTTTTTTTTCTGGATGTACTTCAATATTAGAGGTCCCCCAGCATCTCAGATGTGTCTTACCTCTATATAAAGTTGGAGGATAGTATATAATTTAAGCAGTGCTGCAGGGTATTGGTGCTCTCTATGCTGGGCCTATGCAAGTCGTGAAAGAATGTTGGGGAGCACCAGTACCCTCTAGCACTGATTAAATATACCTTCCTCCAACCCCAACTTTTGGATCATATGTAATGCTTTAGGCCCACTCTCTTTCCAGTACTTCTCCAAAATGAGAGATAACCTATTTCATGTAGGTTTAGGTCTAAAGCTTTTGGTTAATATATGTGTTTAATGTATAGGTCGTCACAATCTGTAATTAACGTTTTGTATTTTATTTTTCTGCAGGTCTGGTTCCAGAACAGAAGAGCAAAGGTCAGACGTCAAGGTGCAAAAGCCACCAAGCCCATTCTTGCAGGCCATCATTATTCCGGCACCTCTGGGGCTAACAGGGCAATGTTTCCTTCAGCACCTGCCCCTAATAGTTCCTCACATCAGATGACTACATCCCGGGCACAGGTCCAGCCTCTGAAAGAATCCCAAATGAATATGTTTCACCAAAACCAGGGATTCCTTCCCTACCCAGATTCATCTTGTAATGTCTCAAGGCAGAGGTTCCTCATGTCCCAGCCAACACCTGGTGCCTACCACCTGCCCCAGGCATCATCCAATGTCTACAATCAGAATGTGAAATCTCAAAACCCTCTGTGGAACCAACAGACAACCAACAGAGTTTATACAAATATGATGGAGACGGTGTTGGACCTCAGCAGAAGACCCTCCCAGCAGATGCCAGTTCAGCCAATGCTCATGAACAGCTTCCAAACCAACAAGAACATCAAACCAGAGGTGTATACTACCAGCCCTCAGATACCTGTATCTACCACTTCAAGCCAGGTGAGCTTGTTTGCCAACCAAGAGCCGTGTCACATGTCAACAACACAGGGCGGAACCTATGGACAAATCTCTCCTATTTCAGATTCTGGTGTCAGTGACACCTCCCCAGAGCCAAGTTCAGACTGGGAAGAAAATGTTGCTTCTGTGCTCCTCAACCTTTAAGGCATAGGGGCAGTTATCGTACACCTGAGTTTGCAATGCTCAGTCATAAACTATGGACTATGGAGTGAAAATGTATAACAAACAAAGGACACAGATGTTGCGATATTTCTTCTGGATATTTTCATTATTGGGTTTGATTTCCTTTATTATGAACTCTTTTTGGTGATAGATGCATTAAGATGTAGTTGATATTCCTAGTTCTTCTTCTAGAATTTAACCCTTCAGCTGTGTGCCCCATGCATTGCTCTGTAACATCCGCAGTTTGAAGACTGTTTTTAGTTATAGTTATACAAAGGGTTAGTGGGattaatatgtctatttattttaacctttttatttagaatctatttatttttttattCCTGTTATGGTTACATCTTTGTATATAAAATGTATCTGCCTGTAACATATATATCTATCAGTGAGGCAATAAAGACAATGTTTCAGACACAAACAGATCTCTGTATTTGGGGTTATTGGCCAAAGTCAGAAGGACTATGCAAATGTGCTTGTGTGTATGCAAATGAGGACAATAATACCATGGCTGATCCAGCCTCAGTAGGTACAGATGCCCCACCCTGCTATTATTAGCCTTAAAGGGCAAGTGACACCTAAAATGAAAAGGCA

CDS

Gene model

Entrez Gene

394439

394379

397759

mRNA

RefSeq

NCBI Nucleotide

Protein

NCBI Protein

RefSeq

More..

RefSeq

Swiss-Prot

More..

RefSeq

Swiss-Prot

More..

Genomic

X. tropicalis

X. laevis.L

X. laevis.S

Genome Browser

(Click image to open in Genome Browser)

Genomic Synteny

Genomicus PANTHER

Expression

Development Stages

Embryonic Tissues

Adult Tissues

Summary for

More Information

Xenbase Expression Details

In situ images

Single cell data at SPRING

Ensembl

Data Mining

X. tropicalis

X. laevis.L

X. laevis.S

XenMine

mix1

mix1.L

mix1.S

Orthology

Knowledgebases

Entrez Gene

Genetic Phenotypes

Gene Expression

human

OMIM:Gene, GeneCards

MIXL1

OMIM

Ensembl, Allen Brain Atlas, Protein Atlas

mouse

MGI, AGR

Mixl1

MGI, IMPC

Ensembl, Allen Brain Atlas, Eurexpress, MGI

rat

zebrafish

ZFIN, AGR

mixl1

ZFIN

Ensembl

chicken

GEISHA

MIXL1

Ensembl

fruit fly

worm

Publications

First

Mix.1, a homeobox mRNA inducible by mesoderm inducers, is expressed mostly in the presumptive endodermal cells of Xenopus embryos., Cell 1989

Most Recent

Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Elife 2020

All

View All Papers 22 paper(s) referencing morpholinos 1 paper(s) referencing Disease Ontology

Functional Ontologies

X. tropicalis

X. laevis.L

X. laevis.S

5 terms

6 terms

8 terms

PANTHER

mix1

KEGG Pathways

KOG

[K] Transcription factor PRD and related proteins, contain PAX and HOX domains

Reagents

X. tropicalis

X. laevis.L

X. laevis.S

CRISPRscan Tracks

mix1

Antibodies

Mix1 Ab1

Morpholinos

mix1 MO1 , mix1 MO2

ORFs

mixl1.S ORF1

Clones

Horizon Source BioScience

Plasmids

Addgene

Symbol legend:

Blast sequence

View sequence

Literature or expression images

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