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Summary Expression Gene Literature (23) GO Terms (16) Nucleotides (90) Proteins (45) Interactants (716) Wiki
XB-GENEPAGE-488076
Gene Symbol:
foxd1

Gene Name:
forkhead box D1

Synonyms:
mgc89744 , Xenopus brain factor 2 , xbf-2 , BF-2 , Xbf2 ( Add synonyms , Nomenclature history )

Gene Function:
forkhead domain transcription factor

Protein Function :
Transcriptional repressor that down-regulates bmp4 signaling in both mesoderm and ectoderm. Regulates mesoderm patterning by repressing ventral mesoderm genes and promoting the expression of dorsolater...[+]


InterPro :
TF fork head CS 2 , WH DNA-bd sf , WH-like DNA-bd sf , TF fork head CS 1 [+]

Interactants:
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Diseases: 


External Links:
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Xenbase Gene ID XB-GENE-488077 XB-GENE-865762 XB-GENE-17339870
Gene Symbol foxd1 foxd1.L foxd1.S
Chromosome Chr1 chr1L chr1S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 493510
373583
108707255
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More.. NCBI Protein TrEMBL
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine foxd1 foxd1.L foxd1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards FOXD1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Foxd1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Foxd1 Ensembl
zebrafish
ZFIN, AGR foxd2 ZFIN Ensembl
chicken
GEISHA FOXD1 Ensembl
fruit fly
worm
Publications
First Identification of a heparin-binding, mesoderm-inducing peptide in the swim-bladder of the red seabream, Pagrus major: a probable fish fibroblast growth factor., Fish Physiol Biochem 1994  
Most Recent Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos., Front Physiol 2020                      
All View All Papers 6 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs 1 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 14 terms 11 terms 4 terms
PANTHER foxd1
KEGG Pathways K09397 K09397 K09397
KOG [K] Transcription factor of the Forkhead/HNF3 family
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks foxd1
Morpholinos (on-target & off-target) foxd1 MO1 foxd1 MO1 foxd1 MO1
ORFs foxd1 ORF1 foxd1.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

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