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Summary Expression Gene Literature (67) GO Terms (2) Nucleotides (87) Proteins (21) Interactants (779) Wiki
XB-GENEPAGE- 488221

Gene Symbol: ptch1

Gene Name: patched 1

Synonyms: XPtc1 , patched , patched1 , Ptc-1 , Ptc1 , X-ptc1
Add Xenopus synonyms , Nomenclature history


Gene Function: hedgehog receptor, signal transduction

Protein Function:


Interactants: YYY

OMIM Disease Associations: MEDULLOBLASTOMA; MDB MEDULLOBLASTOMA, DESMOPLASTIC, INCLUDED... [+]
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Xenbase Gene ID XB-GENE-488222 XB-GENE-865776 XB-GENE-17338927
Gene Symbol ptch1 ptch1.L ptch1.S
Chromosome Chr01 Scaffold32519
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq
Protein NCBI Protein Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v7.2 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene [+] Xl.759
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 62 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine ptch1 ptch1.L ptch1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards PTCH1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Ptch1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN ptch1 ZFIN Ensembl
chicken
GEISHA PTCH1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Accumulation of inactivation in a cloned transient K+ channel (AKv1.1a) of Aplysia. [J Neurophysiol 1995]
Most recent: Genome-wide identification of thyroid hormone receptor targets in the remodeling intestine during Xenopus tropicalis metamorphosis. [Sci Rep 2017]
View All Papers 12 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 2 terms 0 term
EC
PANTHER ptch1
KEGG Pathways K06225
KOG [T] Membrane protein Patched/PTCH
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones   EXRC - 2 clone(s)  
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience
Antibody Ptch1 Ab1 Ptch1 Ab1
Affymetrix 1.0 Str.43169.1.S1_at [+] Xl.759.1.S1_at
Affymetrix 2.0 Xl2.759.1.S1_at

Symbol legend[+]

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