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Summary Expression Gene Literature (192) GO Terms (7) Nucleotides (252) Proteins (36) Interactants (1653) Wiki
XB-GENEPAGE-490377
Gene Symbol: msx1

Gene Name: msh homeobox 1

Synonyms: hox7 , hox-7 , msx-1 , Xmsx-1 , xmsx1 , Xhox-7.1 , msx1-a , msx1-b ( Add synonyms , Nomenclature history )

Gene Function: homeodomain transcription factor

Protein Function :

Interactants: Loading ...
Diseases:  Disease Ontology: orofacial cleft [+]

OMIM: TOOTH AGENESIS, SELECTIVE, 1; STHAG1 [+]

External Disease Links: ClinVar, MalaCards, KEGG Disease, DECIPHER
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Xenbase Gene ID XB-GENE-490378 XB-GENE-490382 XB-GENE-6253888
Gene Symbol msx1 msx1.L msx1.S
Chromosome Chr01 chr1L chr1S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 394692
100125666
399464
mRNA RefSeq RefSeq RefSeq
Protein RefSeq TrEMBL TrEMBL RefSeq TrEMBL RefSeq TrEMBL TrEMBL TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine msx1 msx1.L msx1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tgas131h15      
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards MSX1 OMIM Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Msx1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR msx1a msx1b ZFIN Ensembl
chicken
GEISHA MSX1 Ensembl
fruit fly
worm
WORMBASE
Publications
First Progressively restricted expression of a new homeobox-containing gene during Xenopus laevis embryogenesis., Development 1991            
Most Recent Six1 proteins with human branchio-oto-renal mutations differentially affect cranial gene expression and otic development., Dis Model Mech 2020                    
All View All Papers 45 paper(s) referencing morpholinos 8 paper(s) referencing OMIMs 11 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 3 terms 4 terms
PANTHER msx1
KEGG Pathways K09341 K09341 K09341
KOG [R] Transcription factor MSH, contains HOX domain
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks msx1
Antibodies Msx1/2 Ab1 Msx1/2 Ab1 Msx1/2 Ab1
Morpholinos msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4 msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4 msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.13.0


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