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Summary Expression Gene Literature (194) GO Terms (23) Nucleotides (271) Proteins (48) Interactants (1668) Wiki
XB-GENEPAGE-490377
Gene Symbol:
msx1

Gene Name:
msh homeobox 1

Synonyms:
hox7 , hox-7 , msx-1 , Xmsx-1 , xmsx1 , Xhox-7.1 , msx1-a , msx1-b ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :


InterPro :
Homeobox metazoa , Homeobox CS , Homeobox dom , Homeobox-like sf [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
orofacial cleft [+]

OMIM:
TOOTH AGENESIS, SELECTIVE, 1; STHAG1 [+]

External Links:
1/9
 
Xenbase Gene ID XB-GENE-490378 XB-GENE-490382 XB-GENE-6253888
Gene Symbol msx1 msx1.L msx1.S
Chromosome Chr1 chr1L chr1S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 394692
100125666
399464
mRNA RefSeq RefSeq RefSeq
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine msx1 msx1.L msx1.S
Phenotype X. tropicalis X. laevis.L X. laevis.S
Smith Morpholino Screen tgas131h15      
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards MSX1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Msx1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Msx1 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR msx1a msx1b ZFIN Ensembl
chicken
GEISHA MSX1 Ensembl
fruit fly
worm
Publications
First Progressively restricted expression of a new homeobox-containing gene during Xenopus laevis embryogenesis., Development 1991            
Most Recent The transcription factor Hypermethylated in Cancer 1 (Hic1) regulates neural crest migration via interaction with Wnt signaling., Dev Biol 2020  
All View All Papers 45 paper(s) referencing morpholinos 10 paper(s) referencing OMIMs 12 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 21 terms 5 terms 6 terms
PANTHER msx1
KEGG Pathways K09341 K09341 K09341
KOG [R] Transcription factor MSH, contains HOX domain
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks msx1
Antibodies Msx1/2 Ab1 Msx1/2 Ab1 Msx1/2 Ab1
Morpholinos msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4 msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4 msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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