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XB-GENEPAGE-
490377
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Gene Symbol: msx1
Gene Name: msh homeobox 1 Synonyms: hox7 , hox-7 , msx-1 , Xmsx-1 , xmsx1 , Xhox-7.1 , msx1-a , msx1-b Add Xenopus synonyms , Nomenclature history Gene Function: homeodomain transcription factor Protein Function  :
Interactants: Loading ... 
Disease Ontology: OROFACIAL CLEFT OMIM Diseases: TOOTH AGENESIS, SELECTIVE, 1; STHAG1 |
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1/9 | Xenbase Gene ID | XB-GENE-490378 | XB-GENE-490382 | XB-GENE-6253888 | ||||||||||
| Gene Symbol | msx1 | msx1.L | msx1.S | ||||||||||
| Chromosome | Chr01 | chr1L | chr1S | ||||||||||
| Molecules | tropicalis | laevis.L | laevis.S | ||||||||||
| Gene |
Genomic sequence
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Genomic sequence
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Genomic sequence
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| CDS |
Gene model
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Entrez Gene
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Entrez Gene
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Entrez Gene
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| mRNA |
Refseq
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Refseq
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Refseq
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| Protein
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Refseq
TrEMBL
TrEMBL
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Refseq
TrEMBL
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Refseq
TrEMBL
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| Genomic | tropicalis | laevis.L | laevis.S | ||||||||||
| Genome Browser |
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| Links |
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| Genomic Synteny | Genomicus | ||||||||||||
| Expression | tropicalis | laevis.L | laevis.S | ||||||||||
| Ensembl | Ensembl | ||||||||||||
| UniGene | Str.2153 | Xl.60027 | Xl.45216 | ||||||||||
| RNA-Seq profile | Stage profile: |
Stage profile:
Tissue heatmap:
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| Experimental regulation |
Regulation heatmap:
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| Images | 135 expression image(s) for tropicalis and laevis | ||||||||||||
| Data Mining | tropicalis | laevis.L | laevis.S | ||||||||||
| XenMine | msx1 | msx1.L | msx1.S | ||||||||||
| Phenotype | tropicalis | laevis.L | laevis.S | ||||||||||
| Smith Morpholino Screen | tgas131h15 | ||||||||||||
| Orthology |
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| human |
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| mouse |
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| zebrafish |
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| chicken |
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| fruit fly |
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| worm |
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| Publications | |||||||||||||
| First: |
Progressively restricted expression of a new homeobox-containing gene during Xenopus laevis embryogenesis. [Development 1991]
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| Most recent: | Early specification and development of rabbit neural crest cells. [Dev Biol 2018] | ||||||||||||
| View All Papers 46 paper(s) referencing morpholinos 5 paper(s) referencing OMIMs 6 paper(s) referencing Disease Ontology | |||||||||||||
| Functional Ontologies | tropicalis | laevis.L | laevis.S | ||||||||||
| GO | 4 terms | 3 terms | 3 terms | ||||||||||
| PANTHER | msx1 | ||||||||||||
| KEGG Pathways | K09341 | K09341 | K09341 | ||||||||||
| KOG |
[R] Transcription factor MSH, contains HOX domain
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| Reagents | tropicalis | laevis.L | laevis.S | ||||||||||
| CRISPR / TALEN | CRISPR tools | CRISPR tools | CRISPR tools | ||||||||||
| Clones | EXRC - 2 clone(s) | ||||||||||||
| GE Dharmacon | GE Dharmacon | GE Dharmacon | |||||||||||
| Source BioScience | Source BioScience | Source BioScience | |||||||||||
| Antibody | Msx1/2 Ab1 | Msx1/2 Ab1 | Msx1/2 Ab1 | ||||||||||
| Morpholino | msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4 | msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4 | msx1 MO1 , msx1 MO2 , msx1 MO3 , msx1 MO4 | ||||||||||
| Affymetrix 1.0 | Str.2153.1.S1_at | Xl.1794.1.A1_at | Xl.16449.1.S1_at | ||||||||||
| Affymetrix 2.0 | Xl2.45216.1.S1_at | Xl2.16449.1.S1_at | |||||||||||
Symbol legend[+]
