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Summary Expression Gene Literature (19) GO Terms (8) Nucleotides (84) Proteins (34) Interactants (56) Wiki
XB-GENEPAGE-491204
Gene Symbol:
spdef

Gene Name:
SAM pointed domain containing ETS transcription factor

Synonyms:
pdef ( Add synonyms , Nomenclature history )

Gene Function:
transcription factor

Protein Function :


InterPro :
Pointed dom , WH DNA-bd sf , WH-like DNA-bd sf , Ets dom [+]

Interactants:
Loading ...

Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-491205 XB-GENE-17333285 XB-GENE-6488422
Gene Symbol spdef spdef.L spdef.S
Chromosome Chr2 chr2S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1
CDS Gene model Gene model
Entrez Gene 779866
108709449
mRNA RefSeq NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein NCBI Protein  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine spdef spdef.L spdef.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards SPDEF OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Spdef MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Spdef Ensembl
zebrafish
spdef Ensembl
chicken
GEISHA SPDEF Ensembl
fruit fly
worm
Publications
First Epigenetic homogeneity in histone methylation underlies sperm programming for embryonic transcription., Nat Commun 2020                
Most Recent Epigenetic homogeneity in histone methylation underlies sperm programming for embryonic transcription., Nat Commun 2020                
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 6 terms 0 term 4 terms
PANTHER spdef
KEGG Pathways K09442 K09442
KOG [K] ERG and related ETS transcription factors
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks spdef
ORFs spdef ORF1
Clones Horizon Horizon
Plasmids Addgene Addgene

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