elavl2 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (15)

Nucleotides (125)

Interactants (35)

XB-GENEPAGE-491748

Gene Symbol: elavl2 Gene Name: ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B) Synonyms: elrB, hub, heln1, hel-n1 Add Xenopus synonyms Gene Function: RNA binding Interactants: elavl1(6) , elavl3(4) , elavl4(4) , gdf1(2) , 3A10(1) , Isl1 Ab1(1) , Somite Ab1(1) View All

XB-GENE-491749

XB-GENE-6254447

XB-GENE-866091

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		Refseq >NM_001030327\|Xenopus (Silurana) tropicalis ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B) (elavl2), mRNA TTGCGCGGGAGCACACAGAGAGCAGGCGGTCCGGCAACTTGCGTTCGGCTTAGGAACGTCGCGGATATCGCTTTCTTTTGACGGAGTGGAACGCCACTATCGCCTTACGAATGACGAAACGACAGTCTAACCTTGGACGCGTGAGTAAAACGGCAACTCCAAACTAACATGGCAGTCAGACTGTGTGATGTGGCTTCTCTGCTTAGAAGTGGCTCGTGGGCAGCAGAGCCTTGGACTGGGCAGGTAATTGCTGCCATGGAAACACAGCTGTCCAATGGACCCACTTGTAATAACACAGCAAATTGTCCAAACACCATAAACAACTGTTCATCACCAGTTGAATCTAGCAACACAGAAGACAGCAAGACCAATCTTATAGTGAACTACCTTCCGCAGAACATGACACAGGAAGAATTGAAAAGTTTGTTTGGGAGCATTGGTGAGATAGAGTCCTGTAAACTAGTAAGGGACAAAATTACAGGACAAAGCTTGGGTTATGGCTTTGTGAACTACATTGACCCTAAGGATGCTGAGAAGGCTATCAATACGCTGAATGGACTGAGACTCCAGACTAAAACAATTAAAGTATCCTATGCCAGACCGAGTTCAGCATCAATACGGGATGCAAATTTGTATGTCAGTGGGCTTCCAAAAACCATGACCCAAAAGGAGCTGGAACAGCTTTTCTCTCAATATGGCCGCATTATTACATCTCGAATTCTAGTTGACCAAGTTACTGGTGTGTCAAGGGGGGTCGGCTTTATTCGCTTTGACAAGAGGATTGAGGCAGAGGAAGCAATCAAAGGACTAAATGGACAAAAGCCACCAGGAGCAACAGAACCCATAACCGTTAAGTTTGCCAACAATCCAAGCCAAAAAGTTAACCACACCATTCTATCTCAGTTGTACCAATCCCCAAACAGGAGGTACCCTGGACCATTGGCTCAGCAGGCTCAACGTTTTAGTAGATTCTCTCCGATGACCATCGATGGTATGACTAGTTTGGCTGGGATTAACTTTCCTGGACATGCTGGTACTGGATGGTGCATATTTGTTTACAACTTGGCTCCTGATGCAGATGAAAGTATCCTGTGGCAAATGTTTGGCCCCTTTGGAGCAGTCACCAATGTAAAGGTCATTCGAGACTTCAATACCAACAAGTGCAAGGGCTTTGGTTTTGTGACTATGACAAACTATGATGAAGCTGCAATGGCTATTGCCAGTCTCAATGGTTACCGCCTGGGAGACAGAGTCTTGCAGGTGTCGTTCAAAACGAGCAAAACACACAAAGCTTAACAAGTTAACTTCTCCCATTTTACACACACGTGCAACAAAGGCAAGTTAATAAACTTTATACTTTTTGAAATTGTCTTTGCAAGTAAGTGTTACACCAAAGTGTGTGGGTTTGAGGGAGATCAGGCAAAGAGAACATGATTTAGTATCTTTAGAATATGTGAGATTGCTATTGTTGGGTTTTGGATTTCTATTTTATGTTTGTGTATGGACCTTAGGTAACAGGGTTTTTACCTGTCACATTACATTATGCCTTCTATTGAGGAGGGGGATCTTTTTAGATATTTCAGCAGTGGGAAGACATTTATGTTCATTTTTTTTTTACATTCTTACCTTCAAATCAGTTAAAAATGCTTTGTTTGGAAGGGTTTTTGTAATGTTCTGTTAACCTGGTTTAGTATATGGAAATTATTTCATTTTTATTATAATTTATAAACATGTAAAACCATATTTATTTTGCGGTTATTTAGGGAATTGGAGGACTCCACTATAAAAAGCCTATTGTAAGAATACTGGAGACTTTTCATAAAGCAGTACCTTGCCAAAGAGATAAGAACCTCTTTGATGTAGGTTTCAAATGAGAAAAAGCATCTATTTTTATAAAAAATAAAAAAAAAATGTTCAAGAAACTTTTTACTGGTCCTGGAACAAAATATTTTGACTTGAATACTTTGCAAAATCTACTTCATATGACAGCCTTGTGAGCTTTTAAAACTTACCAGGATATTTGTGTGTAATCAATATTTTCTGAAGGGGGAGGGGCCTGCAGTCTAGCAGTGGGAGGGAAAGAAGAAATTTCTGATATAGGGAGTAATATTTTCTTTTTGTTTAACTTACTGTATTTATATTAAGGGTCAATAGCAGTAGGGCCCAACTATTTCTAGTATTTATCTTCCTGGTTATTATGTGATAAGTGCTCACAGCAATTTGTGAATTTTTCAACCAATTAAATGGAGAGGAAAATCAATCATTAAACAGCTGGCAAGAAAAGTAAATTGCTAGTTTTACTTTTGGGGGAAACAAGAAATCTGTTCTTCCAAAAGCATTCCCTTCAGAAGGAGCTCATGGTGTTTAGTGATGTACTTGCAGTATTGTTTGACAATTTTATTTTGAATGCAATTTTTTTTATATAATTTTATTTTATTTTTTTTGTTAAAAGAAAAAAGTTGCAATTGCACACATGGTTGTACTGCCAAGCTGTAAAGTGATATAATTTCTGTTAAAGATTCTGTTAATTCTAGCACCTGAGCTTTGTGTATTGTAAATAAGATCAGGATCATTTTTGTAATGGCATAGCTAAATAGAATTGTGCAGTTTAATGGTAGATAGCGGTTTTAGTGCTGCCAGATGCTGCATATATTTAGCTTTCCCTATCAAATGGTCTCCTTTTATGTTTAACCAAACTGACTTTGTTTTTTCCTTATGCTAAGTGATGTTGAAACTTTAATAGTTTTGTGTATTATCTTTTTTTTCTTTATATATGGAATTATATTATCTCCTTTTATGTTGTAATTTATGACCCCAATTATGCTGCATCAAATTAGTTGCTAAGTTTTTTTGTCTTTTATTTTACTTATTTTTACCTGTAGTTAATGTTAACTTAAGCTTTATGATGCATCACCGACAGTATGTTAGTGGTATAAAATAAGAATCCATAGATTTGTTTTCTTTTATTTAAACTATATGAGTGCAACTGAAATGTAAGTTTGTATGGTACATAAATCACTGTTGGGGAAAGATTAATAATCCTTAATTTGCATCTAGTTTACAAAAGTGCAAAGTTTTACACATTTTTCGTAGACAGAAAGTAATTATTTACATGCAGTTTTTTGTACAAATAAAAAGCCTTCCCCCCCCCAGGATAAGCAATGTGCTATGCATTACACATTTGTAAATTCTTTAAAAATTATTTTTCTTTTTAATCTGTAGTTCATCAAATATATATACCTTCTATGGTAGTCCAGTACATATACTGTGAAACGTGCGTTTCAAAGTGTCAAGGTAAATTTTCATGCTCTTTCCACTATGGTTTTGAAAATGCTAATAGATTTGTTTCCTCTAATTTTGAGAAAATGTGGGAAATATTTTCAGAATCTTTATAAAGCAGTGGAAAGCAATTGATTAAACTTGAGTTAAATTTGTTAAAACCTTTTATTTCCTTCAGTGCGCTACTTTATTATGTAATTAATCCAAAGTCATACTGCTTTTAGCAGTATGGTGCAAAGAGCATGGAAATTGGGCCTCACTTTGCAGTGTGTCAGAGCACTTAACAAAATGTGAGGCTGGTATTTATTTGAATTTGTACTATATGACTTGATTAACACATCTGTTAAAATAGAATATATATTCTGTTGAGTATTAAACAGGCTGTGCAATTTATTTTGTGTTTGGATCCTTTGTACTTTTCCATGTTCAGTACATCAATAAACAAAAGTTGAAGGGAAA	Refseq >NM_001087566\|Xenopus laevis ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B) (elavl2-a), mRNA AACAACCGACCTGCTTTCATTATCTGCTTTACACCCATTTTTGCGAAGACTGAGCTCATCTGTGCCCTGACAGCAGAAGACGGCAACTCCAAACTAACATGGCAGTCAGACTGTGTGATGTGGCTTCTCTGCTTAGAAGTGGCTCGTGGGCAGCAGAGCCTTGGACTGGGCAGGTAATTGCTGCAATGGAAACACAGCTATCCAATGGACCCACTTGTAACAATACAGCAAATTGTCCAAATACCATAAACTGTTCATCACCAGTTGAATCTAACAACACAGAAGACAGCAAGACCAATCTTATAGTGAACTACCTTCCGCAGAACATGACACAAGAAGAGTTGAAAAGTTTGTTTGGAAGCATTGGTGAGATAGAGTCCTGTAAGCTAGTGAGGGACAAAATTACAGAAGGACAAAGCTTGGGCTATGGCTTTGTGAACTACATTGACCCTAAGGATGCTGAGAAGGCTATTAATACACTGAATGGGCTGAGACTCCAGACCAAAACAATTAAAGTATCCTATGCCAGACCAAGTTCGGCATCAATAAGGGATGCAAACTTGTATGTCAGTGGGCTTCCAAAAACCATGACCCAAAAGGAGCTGGAACAGCTTTTCTCTCAATATGGCCGCATTATTACTTCTCGAATTCTAGTCGACCAAGTTACTGGTGTGTCAAGAGGGGTTGGCTTTATACGCTTTGACAAGAGGATTGAGGCAGAGGAAGCAATCAAAGGACTGAATGGACAAAAGCCGCCTGGAGCAACAGAGCCTATAACGGTGAAGTTTGCCAACAATCCAAGCCAAAAAGTAAACCACACTATTTTATCTCAATTGTACCAATCCCCAAACCGGAGGTACCCTGGACCACTAGCTCAGCAGGCTCAACGTTTTAGGTTGGACAATCTGCTCAATATGGCTTATGGAGGAATAAAGAGTAGATTCTCTCCGATGGCGATCGACGGTATGACTAGTTTGGCTGGGATTAACTTTCCTGGACATGCTGGTACAGGATGGTGCATATTTGTTTACAACTTGGCTCCTGATGCAGATGAAAGTATCCTGTGGCAAATGTTTGGCCCCTTTGGAGCAGTCACCAATGTAAAGGTCATTCGAGATTTCAATACCAACAAGTGCAAGGGCTTTGGTTTTGTGACTATGACAAACTATGATGAAGCTGCAATGGCTATTGCCAGCCTCAATGGGTACCGCCTGGGAGACAGAGTCTTGCAGGTGTCGTTCAAAACGAGCAAAACACACAAAGCTTAACAAGTTAACTTCTCCCATTATATACACACATGCAACAAAGGCAAGTTGATAAACTTTATACTTTTTGAAATTGTCTTTGCAAGTAAGTGTTACACCAAAGTGTGTGGGTTTGAGGGAGCCACGGCAAAATGAGATCATCATTTAGCATCTTTAGAATATGTGAGATTGTTATTGTTGGATTTTGCATTTTTATTTTATGTTTGTGTATGGACCTTGGGTAACAGGGTTTTTACCGGTCATATTACATTATGCCTTCTATTGAGGGGGATTTTTTTTAGATATTTCAG		Refseq >NM_001088144\|Xenopus laevis ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B) (elavl2-b), mRNA CCCGTTTCTATTTAGTACTACCCAACCCCGCTTCCATAGAATTACAGACGGCAACTCCAAACTAACATGGCAGTCAGACTGTGTGATGTGGCTTCTCTGCTTAGAAGTGGCTCGTGGGCAGCAGAGCCTTGGACTGGGCAGGTAATTGCTGCAATGGAAACACAGCTATCCAATGGACCCACTTGTAACAATACAGCAAATTGTCCAAATACCATAAACTGTTCATCACCAGTTGAATCTAACAACACAGAAGACAGCAAGACCAATCTTATAGTGAACTACCTTCCGCAGAACATGACACAAGAAGAGTTGAAAAGTTTGTTTGGAAGCATTGGTGAGATAGAGTCCTGTAAGCTAGTGAGGGACAAAATTACAGAAGGACAAAGCTTGGGCTATGGCTTTGTGAACTACATTGACCCTAAGGATGCTGAGAAGGCTATTAATACAGTGAATGGGCTGAGACTCCAGACCAAAACAATTAAAGTATCCTATGCCAGACCAAGTTCGGCATCAATAAGGGATGCAAACTTGTATGTCAGTGGGCTTCCAAAAACCATGACCCAAAAGGAGCTGGAACAGCTTTTCTCTCAATATGGCCGCATTATTACTTCTCGAATTCTAGTCGACCAAGTTACTGGTGTGTCAAGAGGGGTTGGCTTTATACGCTTTGACAAGAGGATTGAGGCAGAGGAAGCAATCAAAGGACTGAATGGACAAAAGCCGCCTGGAGCAACAGAGCCTATAACGGTGAAGTTTGCCAACAATCCAAGCCAAAAAGTAAACCACACTATTTTATCTCAATTGTACCAATCCCCAAACCGGAGGTACCCTGGACCACTAGCTCAGCAGGCTCAACGTTTTAGGTTGGACAATCTGCTCAATATGGCTTATGGAGGAATAAAGAGTAGATTCTCTCCGATGGCGATCGACGGTATGACTAGTTTGGCTGGGATTAACTTTCCTGGACATGCTGGTACAGGATGGTGCATATTTGTTTACAACTTGGCTCCTGATGCAGATGAAAGTATCCTGTGGCAAATGTTTGGCCCCTTTGGAGCAGTCACCAATGTAAAGGTCATTCGAGATTTCAATACCAACAAGTGCAAGGGCTTTGGTTTTGTGACTATGACAAACTATGATGAAGCTGCAATGGCTATTGCCAGCCTCAATGGGTACCGCCTGGGAGACAGAGTCTTGCAGGTGTCGTTCAAAACGAGCAAAACACACAAAGCTTAACAAGTTAACTTCTCCCATTATATACACACATGCAACAAAGGCAAGTTGATAAACTTTATACTTTTTGAAATTGTCTTTGCAAGTAAGTGTTACACCAAAGTGTGTGGGTTTGAGGGAGCCACGGCAAAATGAGATCATCATTTAGCATCTTTAGAATATGTGAGATTGTTATTGTTGGATTTTGGATTTTTATTTTATGTTTGTGTATGGACCTTGGGTAACAGGGTTTTTACCGGTCATATTACATTATGCCTTCTATTGAGGGGGATTTTTTTTAGATATTTCAGCAGTGGGAAGACGATTTATGTTCCGTTTTTTTACATTCTTACCTTCAAACCTGAGTTAAAGCTTTGGAAGGATTTTTGTTAAAATGGTTAAGTATATGAAAGTTATTTCATTTTTATTATAATTTATAAATGTGTAAAACCATATTTATTTTGCGGTTATTTAGGGAATTGGAGGACTCCACTATAAAAAAAAAAAAA
Protein		Refseq >NP_001025498\|ELAV-like protein 2 [Xenopus (Silurana) tropicalis] MAVRLCDVASLLRSGSWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFSRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSKTHKA UniProtKB	Refseq >NP_001081035\|ELAV-like protein 2 [Xenopus laevis] MAVRLCDVASLLRSGSWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGGIKSRFSPMAIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSKTHKA UniProtKB		Refseq >NP_001081613\|ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B) [Xenopus laevis] MAVRLCDVASLLRSGSWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTVNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGGIKSRFSPMAIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSKTHKA UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis a		laevis b
UniGene		[+] Str.26910	Xl.1648 [+] Xl.50202		Xl.34955 [+] Xl.26023 Xl.74066
Unigene EST Profile			EST Profile		EST Profile
GEO data			GEO		GEO
Images		3 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	ELAVL2
mouse		MGI	Elavl2	All(3) Gene Trapped(1) Targeted, other(2)
zebrafish		ZFIN	elavl2	1 Lines(s)

Publications
First:		Structural and chemical characterization of isolated centrosomes. [Cell Motil Cytoskeleton 1987]
Most recent:		Crystal structure and function of human nucleoplasmin (npm2): a histone chaperone in oocytes and embryos. [Biochemistry 2011]
		View All Papers 2 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		RNA binding nucleic acid binding
Biological:
Cellular Component:
EC:
KOG:		[A] RNA-binding protein ELAV/HU (RRM superfamily)

Reagents		tropicalis	laevis a		laevis b
Clones			open biosystems		open biosystems
			geneservice/RZPD imagenes		geneservice/RZPD imagenes
Affymetrix 1.0		Str.26910.1.S1_at [+] Str.26910.1.S2_at	Xl.1648.1.S1_a_at		Xl.1648.2.S1_at
Affymetrix 2.0			Xl2.1648.2.S1_s_at [+] Xl2.50202.1.A1_at		Xl2.28907.1.A1_at [+] Xl2.34955.1.A1_x_at

Symbol legend[+]