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Summary Expression Gene Literature (116) GO Terms (2) Nucleotides (970) Proteins (38) Interactants (836) Wiki
XB-GENEPAGE- 493023

Gene Symbol: vim

Gene Name: vimentin

Synonyms: vimentin , vim-a , vim-b
Add Xenopus synonyms , Nomenclature history


Gene Function: intermediate filament

Protein Function :
Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either ...[+]


Interactants: Loading ...

Disease Ontology:
   CATARACT 30

OMIM Diseases:
   CATARACT 30, MULTIPLE TYPES; CTRCT30
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Xenbase Gene ID XB-GENE-493024 XB-GENE-866225 XB-GENE-6255792
Gene Symbol vim vim.L vim.S
Chromosome Chr06 chr6L chr6S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq Refseq
Protein Refseq TrEMBL TrEMBL Refseq Swiss-Prot Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus PANTHER
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.43578 [+] Xl.127 [+] Xl.128
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 30 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine vim vim.L vim.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards VIM OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Vim MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR vim ZFIN Ensembl
chicken
GEISHA VIM Ensembl
fruit fly
worm
WORMBASE
Publications
First: Widespread occurrence of intermediate-sized filaments of the vimentin-type in cultured cells from diverse vertebrates. [Exp Cell Res 1979]
Most recent: The Xenopus animal cap transcriptome: building a mucociliary epithelium. [Nucleic Acids Res 2018]
View All Papers 5 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 2 terms 2 terms 2 terms
PANTHER vim
KEGG Pathways K07606 K07606 K07606
KOG [DY] Nuclear envelope protein lamin, intermediate filament superfamily
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience Source BioScience
Antibody Vim Ab1 , Vim Ab2 , Vim Ab3 , Vim Ab4 Vim Ab2 , Vim Ab3 , Vim Ab4 , Vim Ab1 Vim Ab2 , Vim Ab3 , Vim Ab4 , Vim Ab1
ORF vim.L ORF3 , vim.L ORF2 , vim.L ORF1 vim.S ORF2 , vim.S ORF1
Affymetrix 1.0 Str.26487.1.A1_at [+] Xl.127.1.S1_at Xl.128.1.S1_at
Affymetrix 2.0 Xl2.127.1.S1_at [+] Xl2.128.1.S1_at

Symbol legend[+]
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Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556