Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (133) GO Terms (2) Nucleotides (992) Proteins (54) Interactants (967) Wiki
XB-GENEPAGE-493023
Gene Symbol:
vim

Gene Name:
vimentin

Synonyms:
vimentin , vim-a , vim-b ( Add synonyms , Nomenclature history )

Gene Function:
intermediate filament

Protein Function :
Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either ...[+]


InterPro :
Znf RING , APC su10/DOC dom , PHR sf , Ig E-set [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
cataract 2 multiple types [+]

OMIM:
CATARACT 30, MULTIPLE TYPES; CTRCT30

External Links:
1/2
 
Xenbase Gene ID XB-GENE-493024 XB-GENE-866225 XB-GENE-6255792
Gene Symbol vim vim.L vim.S
Chromosome Chr6 chr6L chr6S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 496727
386601
386600
mRNA NCBI Nucleotide NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. RefSeq Swiss-Prot  More.. NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine vim vim.L vim.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards VIM OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Vim MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Vim Ensembl
zebrafish
ZFIN, AGR vim ZFIN Ensembl
chicken
GEISHA VIM Ensembl
fruit fly
worm
Publications
First Widespread occurrence of intermediate-sized filaments of the vimentin-type in cultured cells from diverse vertebrates., Exp Cell Res 1979  
Most Recent The interconnection between cytokeratin and cell membrane-bound β-catenin in Sertoli cells derived from juvenile Xenopus tropicalis testes., Biol Open 2019                                  
All View All Papers 5 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 5 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 2 terms 1 terms 2 terms
PANTHER vim
KEGG Pathways K07606 K07606 K07606
KOG [DY] Nuclear envelope protein lamin, intermediate filament superfamily
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks vim
Antibodies Vim Ab1 , Vim Ab2 , Vim Ab3 , Vim Ab4 Vim Ab2 , Vim Ab3 , Vim Ab4 , Vim Ab1 Vim Ab2 , Vim Ab3 , Vim Ab4 , Vim Ab1
ORFs vim.L ORF1 , vim.L ORF2 , vim.L ORF3 vim.S ORF1 , vim.S ORF2
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.16.0
Major funding for Xenbase is provided by grant P41 HD064556