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XB-GENEPAGE-
493549
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Gene Symbol: myf5
Gene Name: myogenic factor 5 Synonyms: Xmyf5 , Xmyf-5 , myf-5 Add Xenopus synonyms , Nomenclature history Gene Function: myogenic helix-loop-helix transcription factor Protein Function  :
Acts as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. Induces fibroblasts to differentiate into myoblasts. Probable...[+]
Interactants: Loading ... 
Disease Ontology Associations: OMIM Disease Associations: MYOGENIC FACTOR 5; MYF5 |
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1/8 | Xenbase Gene ID | XB-GENE-493550 | XB-GENE-866267 | XB-GENE-17336781 | ||||
| Gene Symbol | myf5 | myf5.L | myf5.S | ||||
| Chromosome | Chr03 | chr3L | chr3S | ||||
| Molecules | tropicalis | laevis.L | laevis.S | ||||
| Gene |
Genomic sequence
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Genomic sequence
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Genomic sequence
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| CDS |
Gene model
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Entrez Gene
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Entrez Gene
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Entrez Gene
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| mRNA |
Refseq
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Refseq
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NCBI Nucleotide
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| Protein
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Refseq
TrEMBL
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Refseq
Swiss-Prot
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TrEMBL | ||||
| Genomic | tropicalis | laevis.L | laevis.S | ||||
| Genome Browser |
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| Links |
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| Genomic Synteny | Genomicus | ||||||
| Expression | tropicalis | laevis.L | laevis.S | ||||
| Ensembl | Ensembl | ||||||
| UniGene | Str.7424 | Xl.146 [+] | |||||
| RNA-Seq profile | Stage profile: |
Stage profile:
Tissue heatmap:
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| Experimental regulation |
Regulation heatmap:
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| Images | 87 expression image(s) for tropicalis and laevis | ||||||
| Data Mining | tropicalis | laevis.L | laevis.S | ||||
| XenMine | myf5 | myf5.L | myf5.S | ||||
| Phenotype | tropicalis | laevis.L | laevis.S | ||||
| Smith Morpholino Screen | |||||||
| Orthology |
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| human |
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| mouse |
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| zebrafish |
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| chicken |
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| fruit fly |
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| Publications | |||||||
| First: | The Xenopus MyoD gene: an unlocalised maternal mRNA predates lineage-restricted expression in the early embryo. [Development 1990] | ||||||
| Most recent: |
Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus. [Dev Cell 2018]
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| View All Papers 36 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs 3 paper(s) referencing Disease Ontologies | |||||||
| Functional Ontologies | tropicalis | laevis.L | laevis.S | ||||
| GO | 16 terms | 7 terms | 5 terms | ||||
| PANTHER | myf5 | ||||||
| KEGG Pathways | K18484 | K18484 | K18484 | ||||
| KOG |
[K] Myogenic helix-loop-helix transcription factor
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| Reagents | tropicalis | laevis.L | laevis.S | ||||
| CRISPR / TALEN | CRISPR tools | CRISPR tools | CRISPR tools | ||||
| Clones | EXRC - 2 clone(s) | EXRC - 2 clone(s) | |||||
| GE Dharmacon | GE Dharmacon | GE Dharmacon | |||||
| Source BioScience | Source BioScience | ||||||
| Morpholino | myf5 MO1 , myf5 MO2 , myf5 MO3 , myf5 MO4 | myf5 MO1 , myf5 MO2 , myf5 MO3 , myf5 MO4 | myf5 MO1 , myf5 MO2 , myf5 MO3 , myf5 MO4 | ||||
| Affymetrix 1.0 | Str.7424.1.S1_at | Xl.146.1.S1_at | |||||
| Affymetrix 2.0 | Xl2.34079.1.A1_at [+] | ||||||
Symbol legend[+]
