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Summary Expression Gene Literature (32) GO Terms (24) Nucleotides (334) Proteins (39) Interactants (289) Wiki
XB-GENEPAGE-494816
Gene Symbol:
smarca5

Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

Synonyms:
iswi , imitation switch ISWI , SNF2H ( Add synonyms , Nomenclature history )

Gene Function:
chromatin remodeling complex component

Protein Function :
Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phos...[+]


InterPro :
CA dom sf , CA dom , Carbonic anhydrase a-class CS , Carbonic anhydrase a-class [+]

Interactants:
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Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-494817 XB-GENE-17341552 XB-GENE-866389
Gene Symbol smarca5 smarca5.L smarca5.S
Chromosome Chr1 Scaffold111 chr1S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 493355
108705450
399165
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein TrEMBL NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine smarca5 smarca5.L smarca5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC, AGR, Monarch, OMIM, GeneCards SMARCA5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Smarca5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Smarca5 Ensembl
zebrafish
ZFIN, AGR smarca5 ZFIN Ensembl
chicken
GEISHA SMARCA5 Ensembl
fruit fly
Publications
First Active remodeling of somatic nuclei in egg cytoplasm by the nucleosomal ATPase ISWI., Science 2000  
Most Recent Generation of Remosomes by the SWI/SNF Chromatin Remodeler Family., Sci Rep 2019  
All View All Papers 1 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 22 terms 10 terms 12 terms
PANTHER smarca5
KEGG Pathways K11654 K11654 K11654
KOG [K] Chromatin remodeling complex WSTF-ISWI, small subunit
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks smarca5
Morpholinos smarca5 MO1
ORFs smarca5.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience
Plasmids Addgene Addgene

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