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Summary Expression Gene Literature (29) GO Terms (19) Nucleotides (332) Proteins (35) Interactants (282) Wiki
XB-GENEPAGE-494816
Gene Symbol:
smarca5

Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

Synonyms:
iswi , imitation switch ISWI , SNF2H ( Add synonyms , Nomenclature history )

Gene Function:
chromatin remodeling complex component

Protein Function :
Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phos...[+]


InterPro :
CA dom sf , CA dom , Carbonic anhydrase a-class CS , Carbonic anhydrase a-class [+]

Interactants:
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Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-494817 XB-GENE-17341552 XB-GENE-866389
Gene Symbol smarca5 smarca5.L smarca5.S
Chromosome Chr01 Scaffold111 chr1S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 493355
108705450
399165
mRNA RefSeq NCBI Nucleotide RefSeq
Protein RefSeq NCBI Protein RefSeq
Genomic
 tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine smarca5 smarca5.L smarca5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards SMARCA5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Smarca5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Smarca5 Ensembl
zebrafish
ZFIN, AGR smarca5 ZFIN Ensembl
chicken
GEISHA SMARCA5 Ensembl
fruit fly
worm
Publications
First Active remodeling of somatic nuclei in egg cytoplasm by the nucleosomal ATPase ISWI., Science 2000  
Most Recent Direct observation of coordinated DNA movements on the nucleosome during chromatin remodelling., Nat Commun 2019  
All View All Papers 1 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 18 terms 6 terms 9 terms
PANTHER smarca5
KEGG Pathways K11654 K11654 K11654
KOG [K] Chromatin remodeling complex WSTF-ISWI, small subunit
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks smarca5
Morpholinos smarca5 MO1 smarca5 MO1 smarca5 MO1
ORFs smarca5.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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