Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (7) GO Terms (4) Nucleotides (133) Proteins (10) Interactants (93) Wiki
XB-GENEPAGE- 494959

Gene Symbol: sdc1

Gene Name: syndecan 1

Synonyms: syndecan1 , Syn1 , xSyn1 , Syndecan-1 , XSyndecan-1
Add Xenopus synonyms , Nomenclature history

Gene Function: cell-surface heparan sulfate proteoglycan

Protein Function:
Cell surface proteoglycan.


Interactants: Loading ...

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-494960 XB-GENE-6251594 XB-GENE-17339460
Gene Symbol sdc1 sdc1.L sdc1.S
Chromosome Chr05 chr5L
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein TrEMBL NCBI Protein TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.52547 Xl.80168 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 1 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine sdc1 sdc1.L sdc1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SDC1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Sdc1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN
chicken
GEISHA SDC1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Embryonic expression patterns of Xenopus syndecans. [Mech Dev 1996]
Most recent: Angiopoietin-like 4 Is a Wnt Signaling Antagonist that Promotes LRP6 Turnover. [Dev Cell 2017]
View All Papers 1 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs
Functional Ontologies tropicalis laevis.L laevis.S
GO 4 terms 2 terms 0 term
PANTHER sdc1
KEGG Pathways K06257
KOG
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Morpholino sdc1 MO1 , sdc1 MO2 sdc1 MO1 , sdc1 MO2 sdc1 MO1 , sdc1 MO2
Affymetrix 1.0 Str.4553.1.S1_at [+] Xl.21504.1.S1_at [+]
Affymetrix 2.0 Xl2.11841.1.S1_at [+]

Symbol legend[+]
Xenbase: The Xenopus laevis and X. tropicalis resource.
Version: 4.8.2
Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556