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Summary Expression Gene Literature (7) GO Terms (11) Nucleotides (144) Proteins (17) Interactants (139) Wiki
XB-GENEPAGE-494959
Gene Symbol:
sdc1

Gene Name:
syndecan 1

Synonyms:
syndecan1 , Syn1 , xSyn1 , Syndecan-1 , XSyndecan-1 ( Add synonyms , Nomenclature history )

Gene Function:
cell-surface heparan sulfate proteoglycan

Protein Function :
Cell surface proteoglycan.


InterPro :
ABC transporter-like , ABC tran Xtn , P-loop NTPase , AAA+ ATPase [+]

Interactants:
Loading ...

Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-494960 XB-GENE-6251594 XB-GENE-17339460
Gene Symbol sdc1 sdc1.L sdc1.S
Chromosome Chr5 chr5L
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1
CDS Gene model Gene model
Entrez Gene 100038138
398348
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein NCBI Protein NCBI Protein  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine sdc1 sdc1.L sdc1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards SDC1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Sdc1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Sdc1 Ensembl
zebrafish
chicken
GEISHA SDC1 Ensembl
fruit fly
worm
Publications
First Embryonic expression patterns of Xenopus syndecans., Mech Dev 1996            
Most Recent Angiopoietin-like 4 Is a Wnt Signaling Antagonist that Promotes LRP6 Turnover., Dev Cell 2017                                  
All View All Papers 1 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 10 terms 3 terms 0 term
PANTHER sdc1
KEGG Pathways K06257
KOG
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks sdc1
Morpholinos (on-target & off-target) sdc1 MO2 sdc1 MO1 , sdc1 MO2
Clones Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

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