hmmr Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (10)

Nucleotides (274)

Interactants (19)

XB-GENEPAGE-5851600

[provisional- machine annotated only] Gene Symbol: hmmr [Predicted: Source is Human Entrez Gene] Gene Name: hyaluronan-mediated motility receptor (RHAMM) [Predicted: Source is Human Entrez Gene] Synonyms: rhamm, xrhamm Add Xenopus synonyms Gene Function: Myosin class II heavy chain Interactants: cd44(3) , has2(3) , tpx2(3) , has1(2) , has3(2) , ran(2) , bard1(1) View All

XB-GENE-5851601

XB-GENE-5851659

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >BC123096\|Xenopus tropicalis hypothetical protein LOC779567, mRNA (cDNA clone IMAGE:7879750), partial cds GTGATTTCGGCTCTGAGCAGTAGGGAAGGTGGTCGGGCGCTGGCTTCAGCCAAAATGTCTTTTCCCAAGGCTCCTCTGAAGAGATTTAATGAGAATATTGGATGTGCCCCTGCGCCTGGATCTTATGATGTGAAGAATTACGAGGGCCTCAAAGGACCTGTATCTTTTGATAAATCCCAGAGATTTCGTCCTAAAAAAGATTCCAGCAATGAAAGCCAACTCATGGATAAAGAAGAGGAATTATCTCCAGTTCGTCTACGAAAACATTCTCTTGGGTCTACTCCAAACCTGAGACAGAAACCAGAAAAAGATGCAGATTTTATGAAAGAAATTAAGAAGCAGAAATCATTGGAAAAGGAGATACGCTCACTTTTGAAGGAACGTGCTGAACAGGACAAGAAGCTCCAGACATTAGAGGAAGAGTTCAAAAAGACAGAAGTAAAACTGATTACTGCTTTGAGAGAGAAGACATCACTTTCTGCTACCATAGCATCTCTGGAACGACACATTGCTGATTTAGACAAAGCAAACGAGCTCTTAAAGACAAAGTTTTCTGATGACAGCTCCAAGAAGAAAATAAACAATTTATGTTCAGAGCTTATTGAAGTAAAAAATAAAGTGGATGCCAAAGATAAGGAAATTATTAGCTTACAAGCAAACTTTGAAGAGCAAGTTAAAGTACTTCAGGCAAATCTAATGTCTTGTAAGGAAACCTTGGAGACTGTGCAAGAGAAGAACACATCTCTGGAAGAGAACTATCAGGCTGCAAATTTGCACAGTGAAGCCTTGGCAAAGGATCTGGATAATGCCCGTGTTTTAATTGAGGAGCTGAAAGGAGAAAACCGAAACCTTCAAGGCTACCTCTCAGATGCCCAAGAACAAATGCAGGATATGCGCATAAAAATGAGCGCTAAGGAACGCGAGTTTGAGAATAATTTGCAAAATATGACCTCTTCTATGTCGGAACAAAGCAAGGCCCTGGTGATACAAGAGGAAATGGAAAGCAAACTTCATGAAGCAGAGAAAAACTTGGTGCTGGCATTTGAGAAAATAGCACAGCTTGAACAAGAACTCAATGCAGTGAAAGAAGAAAAATATAAACTGATGGAGGAAAAGACTGAAACTGAGGCAAAATTATCTGCATCTATGGAACAAATGAGTGCTGTTGTTGCCCAGTATGAACATTACAAGGTGTGCCTGGACCAAACATCAGATTTACTGAAGCAGAAAGAACAGGAAGAAATGAGCGCAAAGGATTACTTTAGCCAAAGGGAAAAAGAGCTCCTGGCACAAATAAAAGAGCTGGAAGAGAAGTGTTTGGCACTGATACAAGAAAAGGAAACACTTGTTTCAGAAAGTGAAGAAAAAAAAAAAAAAAAAA	Refseq >NM_001094467\|Xenopus laevis hyaluronan-mediated motility receptor (RHAMM) (hmmr), mRNA AAAACAAGTTATTTTCTACATTGTTGCCGAGCTGAGCTGTCAGTGATTTCTGTGCTGAACTGAAAGAAAGCATCGCGGGCTCCAGCCAAAATGTCATTTCCCAAGGCTCCTCTGAAGAGATTTAATGAACATATTGGATGTGCTCCTGCACCTGGATCTTATGATGTGAAGCTTTACGACGGCCTCAAAGGGCCCGTTTCTTTTGAAAAATCCCACAGATTTCAAGCTAAAAAAGATTCCAACAATGAAAGCCAGATCATGGATAAAGAAGAGGAACTATCTCCAGTTCGCCTACGAAAACATTCCTTTGGATCAGCTCAAAACTTGAGGCAGAAACCAGAGAAAGATGCAGATTTTGTCAAAGAGATGAAGAAGCAGAAGTCATTGGAAAAAGAGATCCGCTCGCTTATAAAGGAACGTACTGAACAAGACAAGAAGCTGCAGGCTTTAGAGGAGGAGTTTAAAAAGACAGAAGTAAAATTGGTTACTGCTTTGAGAGAGAAGACCTCGCTTTCTGCTTCCATAGCATCTATGGAACGACACATCGCTGATTTGGACAAAGCAAATGAACTCTTAAAGACAAAGTTTTCGGACGACAGCTCAAAGAAGAAAATTAACAGTCTTTGCGCCGAACTTATTGAAGTAAAAAATAAAGTGGATGCCAAAGATAAGGAAATTATTAGCAAACAAGCAAACTTTGAAGAACAAATTACTGTACTTCAGGCAAATCTCTTATCTTGTAAGCAAACCTTGGAGACTGTGCAGAAGAAGAATACATTTCTGGAGGAGAACTATCAGGATGCAAATTCACACAGTGAAGCCTTGGAAAAGGATCTGGATAATGCACGTGCTTTAATTGAGGAGCTGAGAGGAGAAAGCAGAAACCTTCAAGACTATCTCTCAGGTGCCCAAGAACAAATGCAGGATATGCGCATGGAAATGAGCACTAAGGAACGGGAGTTTGAAAATAAATTAAAAGATATTTCCTCTTCTATGTCAGAACAAAGCAAGGCCCTGGCAATACAAGGGGAAATGGAAAGCAAACTTCATGAAACCGAGAAGAACTTGGCATTGGCGTTGGAGAAAATAGCACAGCTTGAACAAGAACTCAATGCAGTGAAAGAAGAAAAACATAAACTGATTGAGGAAAAGGCTGAAACAGAGGCAAAGTTGTGTGCGTCTATGGAACAAATGGGGAAAATAAGTACTGCGGTTTCACAATGTGAACAGTACAAGCTGTGCCTGGACCAAACCTCTGATTTACTGAAGCAGAAAGAACAGGAAGAAATGAGCACAAAGGAGAACTTTAGCCTAAGGGAAAAAGAACTCCTGGCACAAATTAAAGAGCTGGATGAAAAGTATTTGGCACAGATACAAGAAAAGGAAACACTTGCATCAGAAAGTAGAGAGAAGGAGAGAACGTTGCAAATTGAGCTGGAAATGGTTAAAGAGAAGATGAGCAAAGAAGAGGACAGCTGCCATGTACTGCGAGAGAAAGAAAAGCAACTGTCTATGCTTTTGCAGAAAGAGATGGAAACTTGCAGCTCCCTGCGCGAGGAATTGCAAAAGGTACAAGAAGAGATGATGAAAGAGAGGCATCTGTTGGAAGAGGAACTGGAGGGAACCTTGGATGAACTAGACCGATTGCAAATTGCAGAAGAACATTCAGACCGATTCATTAAACAGCTTGAAGAGGAAAATAAGCAGCGGGCTGGAGAGTTGGATTATTTGGAGGAAACTCTAAAGGGGAAAAGTGCGGAACTGGAACGAATCAAAGAGGTGCACAGAAAAGCCATGTTGCAACTGAAGGAAGAGCAGAGTAACAACACGCATAAAGTTCAAGAATATGATAGTTTTAGGAGATCAGCATCAACAGAAATTGAATCCTTAAAGTCTACAAACTTGTCCTTGCTAGAAAAAATAGCACAGGCAGAAAAAGACAAGGAAATGCAAGAACAACTTCTTGAAGAGCAAGTCAGGGATAAGTCTGTACTGGAGCAACAATTTATTGACCTAAGAGCGGCTTCAAGCCAAACCAAGGAAGAGTATGAGCAAAAACTTTACGAGTTGCAAGAGACTTCAAACACAACTAAAGAAGGTTTGGAGCAGCAACTTCTTGATCTTCATAAAACATCGGCTAAAGCTGTGGAGGATTTGGAGGAGAAGCTATATAAACTGCAAGAGGCATCAAGCAAAACTAAGGAAGTGCTTGAGCAGCAGGTTAAAGATCTACAGGAAGTATCCAACAAAACAAGAGATGGATTGGAAGAGCAGCTTCAAAAGGTACAAGAGGCATCCACTAAAACTCGAGAAAGTTTAGAGCAGGAGCTTCACGAGTTAAATGAGACATCCGCAAATACCAATAAAGGGTTGGAACAGCAGCTTCATGAGATCCAAAAAGAAGCATCCAGAACTGCAGAAAAATTGGAACAACAGCTTCACGAGCAACAAGAGGTTTCTGCAAAAACTATCAAAGCACTGGAGCAGCAGCTTAAAGATCTTCTAGAAACATCAACCACAACTAAACAAGGGCTGGAGCAACAACTCTGCAAGCTTCAGGAAGACTCCACAAAAACAAAGAATGATTTGGAACAGCAGCTACGAGATCTTCAAGAAGCGTCAGCCAAAACTCAGGACGTGCTGGAAAAGCAGCTACATCTGCTGCAGGAGGAATCTGCCAAAACCAGCAAATTGCTACTGCAGCAGCTTTGCGACCTTCAAGAAGTATCCAATAAAACAAGAGAAAATTTGGAACAACAACTTCAGGAAATGCAAGAGACCTCTTCCAAAACCAAGGCAGAATTGGAGCGGCAGCTTCAGGAGTTACAAGAGACCTCTTCTAATACAAAAGATCTGGAGCAACAGTTGCAAGATGCATGCACTAAAAGAATAGAATTTGAACAGCAGCAGCATGAACTGGAAGAGCTAAGGTTGCAACTTCTTGCATTACAGGAATCTACAGCACTTTCTAAAGAGAAATATATCAGCATGATATGTGATGCAGAATTGAACCTTGAAATGAAAGATGCCAAACTAAAGGAGCTAGAAGAGCAACAGCAGTTACGAGAGGATCCGCTAAGGATGGAATTGGAGCAGCTACAGAAGCAATCTGAGCAGCTGCATGAACTGAAAAGAAAGCAAGAAGAAGAATTGGAACTGTTAAGGAAACAATCTGCAAAGGATGAACAGGATGCAACAGAAGCAAACAAGTGGCGCACCCTTTATGAAGAGTTGCAGAATAAAGTCAGACCTTTCAAGCAACAGCTGGACGCATTCGAAGCTGAAAAGAACGCCATGCTTAATGAGCATGGAGCAGCTCAGGATGAACTGAACAAGCTTAGTGAGGCATATGCAAAACTGCTGGGTCATCAGAATCAGAAACAGAAGATCAAGCATGTGATGAAGCTGAAAACGGAGAATTCTGAGCTCAAACAGGAGGTTTCCAAACTCCGTGCTCAACTTGCAAAAGAGAAGCAGGTAGAAAAGCAGCTGCAGGCGCACCTGAATGAAATCGAGGGAGTGAAAAGGTTCGATCCGTCCAAAGCTTTCAAGCATGATGTCAAAGAGAATGTGTTCCCAAAAGCTCCTTTGCGGGAAGGAAACAGAAACAAATGCTGACTGGGCAATGACTGACTCTGAACCACAATCCTGCATTAGTGCAATTTGTTTTTTTTTTTATATGTTGTATTTTAGAACGTAATCTCTGTGGAAGAATGCTGCTGAAAATTATACATTCTTATCCATATGTGCTTTTTAAATGTCCTATTTATCACTAGTCTCTTTCACAGCTTTTATCATGATTTTATTCTTAACGAAACCACTCTGTCGATTTTGCTTTTAGGATTTTAAATAAAGTTATTATTCTTCATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		NCBI Protein >AAI23097\|LOC779567 protein [Xenopus (Silurana) tropicalis] VISALSSREGGRALASAKMSFPKAPLKRFNENIGCAPAPGSYDVKNYEGLKGPVSFDKSQRFRPKKDSSNESQLMDKEEELSPVRLRKHSLGSTPNLRQKPEKDADFMKEIKKQKSLEKEIRSLLKERAEQDKKLQTLEEEFKKTEVKLITALREKTSLSATIASLERHIADLDKANELLKTKFSDDSSKKKINNLCSELIEVKNKVDAKDKEIISLQANFEEQVKVLQANLMSCKETLETVQEKNTSLEENYQAANLHSEALAKDLDNARVLIEELKGENRNLQGYLSDAQEQMQDMRIKMSAKEREFENNLQNMTSSMSEQSKALVIQEEMESKLHEAEKNLVLAFEKIAQLEQELNAVKEEKYKLMEEKTETEAKLSASMEQMSAVVAQYEHYKVCLDQTSDLLKQKEQEEMSAKDYFSQREKELLAQIKELEEKCLALIQEKETLVSESEEKKKKK	Refseq >NP_001087936\|hyaluronan-mediated motility receptor (RHAMM) [Xenopus laevis] MSFPKAPLKRFNEHIGCAPAPGSYDVKLYDGLKGPVSFEKSHRFQAKKDSNNESQIMDKEEELSPVRLRKHSFGSAQNLRQKPEKDADFVKEMKKQKSLEKEIRSLIKERTEQDKKLQALEEEFKKTEVKLVTALREKTSLSASIASMERHIADLDKANELLKTKFSDDSSKKKINSLCAELIEVKNKVDAKDKEIISKQANFEEQITVLQANLLSCKQTLETVQKKNTFLEENYQDANSHSEALEKDLDNARALIEELRGESRNLQDYLSGAQEQMQDMRMEMSTKEREFENKLKDISSSMSEQSKALAIQGEMESKLHETEKNLALALEKIAQLEQELNAVKEEKHKLIEEKAETEAKLCASMEQMGKISTAVSQCEQYKLCLDQTSDLLKQKEQEEMSTKENFSLREKELLAQIKELDEKYLAQIQEKETLASESREKERTLQIELEMVKEKMSKEEDSCHVLREKEKQLSMLLQKEMETCSSLREELQKVQEEMMKERHLLEEELEGTLDELDRLQIAEEHSDRFIKQLEEENKQRAGELDYLEETLKGKSAELERIKEVHRKAMLQLKEEQSNNTHKVQEYDSFRRSASTEIESLKSTNLSLLEKIAQAEKDKEMQEQLLEEQVRDKSVLEQQFIDLRAASSQTKEEYEQKLYELQETSNTTKEGLEQQLLDLHKTSAKAVEDLEEKLYKLQEASSKTKEVLEQQVKDLQEVSNKTRDGLEEQLQKVQEASTKTRESLEQELHELNETSANTNKGLEQQLHEIQKEASRTAEKLEQQLHEQQEVSAKTIKALEQQLKDLLETSTTTKQGLEQQLCKLQEDSTKTKNDLEQQLRDLQEASAKTQDVLEKQLHLLQEESAKTSKLLLQQLCDLQEVSNKTRENLEQQLQEMQETSSKTKAELERQLQELQETSSNTKDLEQQLQDACTKRIEFEQQQHELEELRLQLLALQESTALSKEKYISMICDAELNLEMKDAKLKELEEQQQLREDPLRMELEQLQKQSEQLHELKRKQEEELELLRKQSAKDEQDATEANKWRTLYEELQNKVRPFKQQLDAFEAEKNAMLNEHGAAQDELNKLSEAYAKLLGHQNQKQKIKHVMKLKTENSELKQEVSKLRAQLAKEKQVEKQLQAHLNEIEGVKRFDPSKAFKHDVKENVFPKAPLREGNRNKC

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.64910	Xl.22720 [+] Xl.73424
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		3 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	HMMR	OMIM:114480
mouse		MGI	Hmmr	All(4) Targeted, knock Out(2)
zebrafish		ZFIN	hmmr

Publications
First:		Abnormal expression of hyaluronan synthases in patients with Waldenstrom''s macroglobulimenia. [Semin Oncol 2003]
Most recent:		Functional analysis of the microtubule-interacting transcriptome. [Mol Biol Cell 2011]
		View All Papers

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:		[Z] Myosin class II heavy chain

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.18084.3.A1_at [+] Str.51552.1.S1_at Str.18084.2.S1_at Str.51552.1.S2_at Str.51552.1.S2_s_at	Xl.7139.1.S1_at [+] Xl.22720.1.S1_at
Affymetrix 2.0			Xl2.22720.1.S1_at [+] Xl2.51202.1.S1_at

Symbol legend[+]