[provisional- machine annotated only] Gene Symbol: patl2 [Predicted: Source is Human Entrez Gene] Gene Name: protein associated with topoisomerase II homolog 2 [Predicted: Source is Human Entrez Gene] Synonyms: P100 Add Xenopus synonyms Gene Function: Uncharacterized conserved protein Interactants: cpeb1(3) , ddx6(3) , eif4e1b(2) , npm1(2) , arhgef5(1) , ccnb1(1) , cdk20(1) View All

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001142207|Xenopus (Silurana) tropicalis protein associated with topoisomerase II homolog 2 (yeast) (patl2), mRNA GGAAACAGCCTGGACTGGTGAAACTGCTCAAGCACTATTGCAAACATGGATCTTGGCTCCGACCAACTTTTGCCAGAGGATTATTTCCTGGCAGAAGAAGGAGCATTGCTAGAGGAAATGGCTGAAGAAGATGAAGAGATTGATCTGTACAATGAGGTGACTTTCGGTTTAGACCAAGAGTCTGATGAAGAACCCACCAAACAGGAGGAGGATCATAAAAAACCTGTTCAAATACCTGAAGCACCAAAGATAGAAGAGCCTGAAAAACCACAACCTATAAAGGAAACAAAGAAACCTGAAAAGTCCCCACTGCGTGAGGTTAAGATTGTGGTGGAATCTGATGAAGAGCATGTGGATCGTTCCATTGACTCTGGGGGTCATACAATGAATTCAACCATGGATGATTCAGAGCTTGGAGACCCTGCTGTAATGAGAGCATTTCACGGAAAACCAACACTGGAGAGCTTGGACAGTGCAGTTGTGGACAGTGGAATAGGATCTACATGGAGTGAACTGGACACAGACTATGATCAGAGTGGAATGGATTCAGGCCTTTGGGAGGCTTCTCCAAAGGTTTCCATGTCGGCAACTGGGCAAATATTGGAGGATAAAGCAATTCTGCGCGTGATGGAAAGGGCACCTTACCTGCCACCAGCGAACTTAGAGTTCTTGGGGTCTCCCCTGCAGAGAGGATTTATGCCTTCACAAAGGCTCCAAAGACCAGAAATGGGTGTTATGTCTCCCAAGCCTTACAGACCAAGATTCATGAGGCAGCAATCTCCTCTTGTACCTCGCTCAATGCGTCCACCATTCCCCTTCACACCACCAAGGAGAGGTCCACCAATCTTTACCCCAAATCAGTCTCCAGGTTTTGTATCTCAGACTCCATTTAGACCAATGTCACCCAACGTCAGCACCCCAACCCGACCAATGACTCCTAAAATGGTGAGGATGCACTTTGGCCCGATGTCTCCCAGCCCGAGCTTCTCCCCATTCTTCAGTCCCATGGGTAATGCACTGCAAAGGTTTAAGGTTCCAGGCCATGTCACACAGTTGCACCCCCAGCATAGAAGGATACTCAGTCAACGTCAGAGGCCGCAAAGTTCAAGTCGGAAGCAGTGGGAAAGTAGACCGGACCCTTATGCGAGCTTAATGTCTCAAAAGGAAAAGGAGTGGGTAATAAAACTGCAAATGATTCAGTTACAAAGTGAAAATCCCCACTTGGATGACTATTATTATCAGGCTTACTATGAAAAGTTAGAGCGTAAATTGGCTGAGGAAGAACTTTTGGGAGAACGCAAGAAACGAGAGCCCACAAAACTGGTTACACCATACATTCAAAAGGCAGAGATGTACGAGTCAGTGGTTCATATTGAGGGTTCCCTTGGACAAGTGGCTGTTTCTACCTGCTACAGCCCGAGGAGAGCAATAGATGCCGTTTCCTACGCCATGCCAGATGAGGCTATTAAAGCACTTGGGTACCAAAGGTTAAGAGTCCTTAAACACACTGAGAAGGTGTTCCTCTTACTCTTAGAAGTTGAAGAGCTGGCAAGGAAGATGTCCCATATACCCGAAGAAGAGCATGCACACTTTCAGCACAAGCAGAACTATAAAGTGCAAAGGATATATGATATTCTCAATATGGCACCCTGCCACAGTGAAGATGAATCTGAGAATGAGTTTTTGCAGCTCTTGCAAGTGGGAAAAGGCAAGAAGTTGATAGCACGGCTCCTTCCATTCCTTACGAGGGTGCAGGCCGGGAAGATTCTCTTGCTCGTAGTTCAGCACTTACCATTCCTCATAAAGAATGACTCGGCGGAAGAGTCCCTTTCTGTTCTCTACGGCCCCCTAAAGAATATAATCAACGGGCTTTCCTTCACTGAACTCATCGGAGTCATTCAAGAGCTCACCCGACCATTGCCAGAGTCCAGTGACCTGCCCCTCACACTTGCATTTCAGAATCAGTTTGGGATCTCGCTGCTCTATTGTTTGCTGAGCCACGGTGAGAGGCTGCTATCATCTGACATGCCTATGGAGCCTTGCATTGGAGACTTTGAAAAATGGACCGATACAGTTTTCCTGGTTGCTAAGGAGCTGTCTCATGTCTCAAAGTCCTCCATGGTGGAGCCACTCTTCTTGCCCAGTAACCTGCTCTCCTTGTTCTGCCGTTACCTGGACAAGCAGACTATTCATAAACTCGAGGACAAAATGGAATGTCCTGCTATCCCCCCATACACAGCTGTACCTTCATGAAATGCTGCATCTGCCATAGAGGAACGGACGAACCTCTGCTTCACTTACCACAAGTTGATGGGAGAGGTGGAGCTTCTGCTGCAGATATTTAAATATTTATTCCTTTTTTAAAGGACTTTTTTTTTTTTTTTTTTTTTTCTTTTTGTTGCTGTTTGTTCAGACTTGAATAAGGCTTTCAAACTTGGTTTCCTTGAAGGTCTGAAGAGCGATGAAATGTGTTCACTTTCTGTTTAAATTATTTGAAAAGCAAGAAATGTCGATGCTGTGTACAGATGTGTGGGGAGGGGGAAGATGGCTGTAAATTTGTTTTTGTTGGTGTGCTACTCGCACAGCATTCACTCAATATCATGTACAGCACTTGCAAAAAAATAAACTGAAAGGAAATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTAAATAAATTATGAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001091842|Xenopus laevis protein associated with topoisomerase II homolog 2 (yeast) (patl2), mRNA CGGAACAGCCTGGACTGGTGACATTGCTCAAGCACTACTCGCAAACATGAATCTCGGCTCCGAACAAATATTGCCAGAAGATTTTTACCTGGCAGAAGAGGGAGCCTTGCTAGAGGAAATGGCTGAAGAAGACGAAGAGATTGATCTGTACAATGAGGTGACTTTTGGCTTAGACCAAGAGTCTGATGAAGAACCTGTCAAACTTGAAGATGACCATACAAAGCCTATTCAAATGCCTGAAGCACCAAAGGAAGAAGAGCCTGAAGCACTACAACCTGTAAAGGAAGCAAAAGGCTCAGAAAAGGCACCACTGCATGAAGTAAAGATTGTGGTGGAACCTCATGAAGATCATGTGGATCTATCCATTGATTCTGGAGGTCATACGATGAATTCAACCATGGATGATTCAGAGCTTGGAGACCCTGCAGTAATGAAGGCGTTTCATGGAAAACCAACACTGGAGAGTTTGGACAGTGCAGTTGTTGACAGTGGAATTGGATCAACATGGAGTGAACTGGACACAGACTATGATCAAAGTGGAATGGATTCTGGCCTTTGGGAGGCATCTCCAAAGGTTTCCACGTATGCAACTGGGCAAATATTGGAGGATAAAGCAATTCTGCGCATAATGGAAAGGGCACCTTACCTGCCACCTACAAATTTAGAGTTTCTGGGGTCTCCTCTGCAGAGAGGATTTATGCCTTCACAAAGGCTCCAAGGACCAGAAATGGGTGCTATGTCTCCCAAGCCTTACAGACCAAGGTTCATGAGGCAGCAATCACCTCTTGTACCACGCTCAATGCGTCCATCATACCCCTTCACGCCACCAAGGAGAGGTCCATCAGTCTTCGCCCCAAATCAGTCTCCAGGTTTTGTGTCTCAGACTCCCTTTAGGCCAATGTCACCCAACGTCAGCACCCCAACCCGACCAATGACTCCTAAAATGGTGAGGATGCACTTTGGCCCAATGTCTCCCAGCCCAAGCTTCTCCCCATTCTTCAGCCCCATGGGTAATGCACTGCAAAGGTTTAAGGTTCCAGGTCATGTCACACAGCTGCACCCACAGCATAGAAGGATACTCAGTCAACGTCAGAGGCCGCAGAGTTCGAGTCGGAGGCAGTGGGAGAGTAGACCAGACCCTTACGCGAGCTTAATGTCTCAAAAGGAAAAGGAGTGGGTAATAAAACTGCAAATGATACAGTTACAAAGTGAAAATCCACATTTGGATGACTACTATTATCAGGCTTACTATGAAAACTTAGAACGTAAATTATCGGAGGAAGAATTTTTGGGAGAACGCAAAAAACGAGAGCCTACAAAACTGGTTACACCATACATTCAAAAGGCAGAGACCTATGAGTCAGTGGTTCACATCGAGGGTTCCCTTGGACAAGTGGCTGTTTCTACCTGCTACAGCCCAAGGAGAGCAATAGATGCTGTTTCCTATGCCATGCCAGATGAGGCTATTAAAGCACTTGGGTACCAAAGATTAAGAGTTCTTAAACATGCTGAGAAGGTGTTCCTCATGTTCTTGGAAGTTGAAGAGCTGGCAAGGAAGATGTCCCATATTCCTGAAGAAGAGCATGTACACTTCCAGCACAAGCAGAACTATAAAGTGCAAAGGATATATGATGTCTTAAAGATTGCACCCTGCCATAATGAAGAAGAATCTGAGTTTTTGCAACTCTTGCAAGTGGGAAAAGGCAAGAAGTTGGTTGCACGGCTCCTTCCATTCCTAAGGAGTGAGCAGGCTAGGGAGATTCTCTTACTCGTAGTTCAGCACTTAACATTTCTCATAAAGAACGACTCTGCAGAAGAGTCCCTTTCTGTTCTCTATGGACCCCTTAAGACTATAATCAATGGGCTCTCCTTCACTGAACTCATCGGAGTCACTCAAGAGCTCACGCGGCCGTTGCCAGAGTCTAATGACCTGCCTCTTACACTTGCATTTCAGAACCAGTTTGGAATCTCGCTATTGTATTGTTTGCTGAGCCACGGTGAGAGGTTGCTGTCATCTGACTTGCCTATGGAGCCTTGCATTGGAGACTTTGAAAAATGGACCGATACAGTTTTCCTGGTTGCTAAGGAGCTGTCTCATGTCTCAAAGTCCTCCATGGTGGAGCCTCTCTTCTTGCCCAGCAACCTGCTCTCCTTGTTCTGCCGTTACCTGGACAAGCAGACTATTCATAAACTTGAGGACAAAATGGAATGTCCTGTTATCCCCCCATACACAGCTGTACCTTCATGAAATGCTACATCTGCCTTAAGAGGACAAGACTATCCTCTGCTTCACTCACCACAAGTTTATGGACAAGTGGAGCTTCTGCTGCGGATATTTAAATATTTATTCCTGTTTTAAAGGACCTTTTTTTGTTGCTTTGTTTGTTCAGACTCGGATAAGGCTTTCAAACTGGAGGAACACGGTTGTTTCCTTGAAGGTCTGAAGAGCGATGAAACATGTTCACTTTCTGTTTAAATGATTTGAAAAGCAAGAAATGTCGATGCTGTGTACAGATGTGTGGGAGGGGGGAAATTGCTGTAAATTTGCTTTTTGTTGGTGTGCTATTTGCACAGCATTCACCCGATATCATGTACAGCACTTGCAAAAAAAAAAAAATAAACTGAAAGGAAATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001135679|protein PAT1 homolog 2 [Xenopus (Silurana) tropicalis] MDLGSDQLLPEDYFLAEEGALLEEMAEEDEEIDLYNEVTFGLDQESDEEPTKQEEDHKKPVQIPEAPKIEEPEKPQPIKETKKPEKSPLREVKIVVESDEEHVDRSIDSGGHTMNSTMDDSELGDPAVMRAFHGKPTLESLDSAVVDSGIGSTWSELDTDYDQSGMDSGLWEASPKVSMSATGQILEDKAILRVMERAPYLPPANLEFLGSPLQRGFMPSQRLQRPEMGVMSPKPYRPRFMRQQSPLVPRSMRPPFPFTPPRRGPPIFTPNQSPGFVSQTPFRPMSPNVSTPTRPMTPKMVRMHFGPMSPSPSFSPFFSPMGNALQRFKVPGHVTQLHPQHRRILSQRQRPQSSSRKQWESRPDPYASLMSQKEKEWVIKLQMIQLQSENPHLDDYYYQAYYEKLERKLAEEELLGERKKREPTKLVTPYIQKAEMYESVVHIEGSLGQVAVSTCYSPRRAIDAVSYAMPDEAIKALGYQRLRVLKHTEKVFLLLLEVEELARKMSHIPEEEHAHFQHKQNYKVQRIYDILNMAPCHSEDESENEFLQLLQVGKGKKLIARLLPFLTRVQAGKILLLVVQHLPFLIKNDSAEESLSVLYGPLKNIINGLSFTELIGVIQELTRPLPESSDLPLTLAFQNQFGISLLYCLLSHGERLLSSDMPMEPCIGDFEKWTDTVFLVAKELSHVSKSSMVEPLFLPSNLLSLFCRYLDKQTIHKLEDKMECPAIPPYTAVPS UniProtKB	Refseq >NP_001085311|protein PAT1 homolog 2 [Xenopus laevis] MNLGSEQILPEDFYLAEEGALLEEMAEEDEEIDLYNEVTFGLDQESDEEPVKLEDDHTKPIQMPEAPKEEEPEALQPVKEAKGSEKAPLHEVKIVVEPHEDHVDLSIDSGGHTMNSTMDDSELGDPAVMKAFHGKPTLESLDSAVVDSGIGSTWSELDTDYDQSGMDSGLWEASPKVSTYATGQILEDKAILRIMERAPYLPPTNLEFLGSPLQRGFMPSQRLQGPEMGAMSPKPYRPRFMRQQSPLVPRSMRPSYPFTPPRRGPSVFAPNQSPGFVSQTPFRPMSPNVSTPTRPMTPKMVRMHFGPMSPSPSFSPFFSPMGNALQRFKVPGHVTQLHPQHRRILSQRQRPQSSSRRQWESRPDPYASLMSQKEKEWVIKLQMIQLQSENPHLDDYYYQAYYENLERKLSEEEFLGERKKREPTKLVTPYIQKAETYESVVHIEGSLGQVAVSTCYSPRRAIDAVSYAMPDEAIKALGYQRLRVLKHAEKVFLMFLEVEELARKMSHIPEEEHVHFQHKQNYKVQRIYDVLKIAPCHNEEESEFLQLLQVGKGKKLVARLLPFLRSEQAREILLLVVQHLTFLIKNDSAEESLSVLYGPLKTIINGLSFTELIGVTQELTRPLPESNDLPLTLAFQNQFGISLLYCLLSHGERLLSSDLPMEPCIGDFEKWTDTVFLVAKELSHVSKSSMVEPLFLPSNLLSLFCRYLDKQTIHKLEDKMECPVIPPYTAVPS UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.29857	Xl.837
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human			PATL2
mouse		MGI	Patl2	All(2) Targeted, other(2)
zebrafish

Publications
First:		Identification of four nuclear transport signal-binding proteins that interact with diverse transport signals. [Mol Cell Biol 1989]
Most recent:		Distinct functions of maternal and somatic Pat1 protein paralogs. [RNA 2010]
		View All Papers

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:		[S] Uncharacterized conserved protein (alt_id KOG:4592)

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.29857.1.A1_at	Xl.837.1.S1_at
Affymetrix 2.0			Xl2.837.1.S1_at

Symbol legend[+]

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