Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (2) GO Terms (3) Nucleotides (150) Proteins (22) Interactants (120) Wiki
XB-GENEPAGE-5900919

Gene Symbol: kdm7a

Gene Name: lysine (K)-specific demethylase 7A

Synonyms: kdm7 , Jhdm1d ( Add Xenopus synonyms , Nomenclature history )

Gene Function: transcriptional regulator

Protein Function :
Histone demethylase required for brain development. Specifically demethylates dimethylated 'Lys-9' and 'Lys-27' (H3K9me2 and H3K27me2, respectively) of histone H3 and monomethylated histone H4 'Lys-20'...[+]

Interactants: Loading ...
Disease Ontology:

OMIM Diseases:

 
Xenbase Gene ID XB-GENE-5900920 XB-GENE-17343126 XB-GENE-5900967
Gene Symbol kdm7a kdm7a.L kdm7a.S
Chromosome Chr03 chr3L chr3S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
mRNA RefSeq RefSeq
Protein RefSeq TrEMBL TrEMBL Swiss-Prot RefSeq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression
Data Mining tropicalis laevis.L laevis.S
XenMine kdm7a kdm7a.L kdm7a.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
KDM7A OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Kdm7a MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR kdm7aa kdm7ab ZFIN Ensembl
chicken
GEISHA KDM7A Ensembl
fruit fly
worm
WORMBASE
Publications
First A genetic map of Xenopus tropicalis., Dev Biol 2011    
Most Recent Characterization of the Rx1-dependent transcriptome during early retinal development., Dev Dyn 2014                                      
All View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 2 terms 0 term 3 terms
PANTHER kdm7a
KEGG Pathways K11445 K11445
KOG [B] F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Dharmacon Dharmacon Dharmacon
ORF kdm7a.S ORF1
Affymetrix 1.0 StrJgi.5962.1.S1_at [+] Xl.13425.1.A1_at [+]
Affymetrix 2.0 Xl2.13425.1.S1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
Xenbase: The Xenopus laevis and X. tropicalis resource.
Version: 4.11.3


Major funding for Xenbase is provided by grant P41 HD064556