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Summary Expression Gene Literature (2) GO Terms (17) Nucleotides (147) Proteins (21) Interactants (111) Wiki
XB-GENEPAGE- 5900919

Gene Symbol: kdm7a

Gene Name: lysine (K)-specific demethylase 7A

Synonyms: kdm7 , Jhdm1d
Add Xenopus synonyms , Nomenclature history


Gene Function: transcriptional regulator

Protein Function:
Histone demethylase required for brain development. Specifically demethylates dimethylated 'Lys-9' and 'Lys-27' (H3K9me2 and H3K27me2, respectively) of histone H3 and monomethylated histone H4 'Lys-20'...[+]


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-5900920 XB-GENE-17343126 XB-GENE-5900967
Gene Symbol kdm7a kdm7a.L kdm7a.S
Chromosome Chr03 chr3L chr3S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
mRNA Refseq Refseq
Protein Refseq Swiss-Prot Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.52832 [+] Xl.13425 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 0 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine kdm7a kdm7a.L kdm7a.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
KDM7A OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Kdm7a MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN ZFIN kdm7aa kdm7ab ZFIN Ensembl
chicken
GEISHA KDM7A Ensembl
fruit fly
worm
WORMBASE
Publications
First: A genetic map of Xenopus tropicalis. [Dev Biol 2011]
Most recent: Characterization of the Rx1-dependent transcriptome during early retinal development. [Dev Dyn 2014]
View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 16 terms 0 term 3 terms
EC
PANTHER kdm7a
KEGG Pathways K11445 K11445
KOG [B] F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
ORF jhdm1d ORF1
Affymetrix 1.0 StrJgi.5962.1.S1_at [+] Xl.13425.1.A1_at [+]
Affymetrix 2.0 Xl2.13425.1.S1_at [+]

Symbol legend[+]

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