kcnj9 Summary [species: Xenopus laevis and Xenopus tropicalis]

Summary

Expression

XB-GENEPAGE-5906251

[provisional- machine annotated only]

Gene Symbol: kcnj9 [Predicted: Source is Human Entrez Gene]

Gene Name: potassium inwardly-rectifying channel, subfamily J, member 9 [Predicted: Source is Human Entrez Gene]

Synonyms: girk3, kir3.3 Add Xenopus synonyms

Gene Function: Inward rectifier K+ channel

Interactants: kcnj3(12) , kcnj6(10) , kcnj5(5) , actb(1) , htr1a(1) , kcnj10(1) , ncam1(1) View All

XB-GENE-5906252

Molecules	tropicalis	laevis
Gene	JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1
	Entrez Gene
mRNA	Refseq >NM_001103084\|Xenopus (Silurana) tropicalis potassium inwardly-rectifying channel, subfamily J, member 9 (kcnj9), mRNA GCTCCCAGTCCCTTCCTCTGCCTCCTCCCTGGCTCTGGGTAGCAGCATCCCTCCTGGCCAAGCATCACTTTGGGCTTCTTACACTTGGACTACCTCTGCCAGCCTCCCTCCCTGCTCTGTGCCAGCTCTGACCATGCAAACCCTGCTGTGGCCCCACAACCATCCCTGCATGTAGCATCTAAAGTTCAGGACTAAGCAGGCACCATGCACTCTGAAGTCAACATGAATTCCTGCAAATTTATGAATCAGGACGTTGAGAACAGAATTAACAAGATTCCCAAACATGTCCAGGGCGGGCCGGTGGTGGTTACCAATCGGACTGTGGTTATGGCAGAACCACCGAAAAGGAGAAGACAAAGATACGTGGAAAAAGACGGTAAATGCAACGTCCACCACGGCAACGTGCGGGAAACGTACAGGTACTTCACGGACATATTTACCACCTTGGTGGACCTCAAGTGGAGGTTTAACTTGCTGGTATTTACAATGGTCTACACCATTACTTGGATTTTCTTTGGGTTTATTTGGTGGCTTATCGCCTACATCCGGGGAGATCTGGACCACATTGAGGATTCCAGCTGGACGCCCTGTGTGGACAAGTTGAACGGATTTGTATCTGCTTTTCTGTTCTCCATTGAGACGGAGACAACGATTGGCTATGGCTACAGAGTCATTACAGACAAGTGTCCGGAGGGCATTGTCCTCTTGTTGGTCCAGGCCATCCTGGGCTCCATCGTTAATGCTTTCATGGTAGGCTGCATGTTTGTCAAGATCTCCCAGCCAAAGAAACGGGCCGAAACCCTTATGTTCTCCAACCAGGCAGTGATTTCCGTGAGAGATGGGAAGCTGTGCCTGATGTTCAGGGTGGGAGACCTGAGGAACTCACATATAGTAGAAGCTTCTATCCGAGCCAAACTGATCAAGTCCAAGCAGACAAAAGAGGGAGAGTTTATCCCACTTAATCAGACGGACATCAACGTGGGTTTCGATACCGGCGATGACCGGCTGTTCCTGGTTTCTCCGCTCATTATCTGCCATGAGTTCAATGAGCAGAGTCCCTTCTGGGAAATCTCTAAGGATCAGCTGGAGAAAGAAGAGTTTGAGATCGTGGTGATTCTGGAAGGGATGGTGGAAGCGACAGGAATGACCTGTCAAGCTCGGAGTTCTTATGTGGAAAATGAAGTCCTGTGGGGCCACCGGTTCATGCCCGTCCTGACCCTGGAGGAGGGGTTCTATGAGGTCGACTACGACACTTTTCACAACACGTACGAGACGCCGACCCCGAGCTGCAGCGCCAAGGAACTGGCGGAGCAAAACGCCAAAGGAGAGAACGTCCTGATTTCCACCGGTGGCAAGAACAAGCCCCACCTGGAAAATCAGGGGCCCGAGATCACAGAACAGAAGGTGGAGCCCCTAGTGGCCAACGGAGATATCAGCAAGACCAAGCTGGAAGTTCCAGAGTGAATAAAATGAATGACTGGATCTTTTAAACAGCAAATCAAAAACTGTGCCTGTTATCTTTTTTTTAATGGGACACTGCTCTTACACAGAGAGGCCATTGGTTAAACTCTGCCATGTTGTCCTATGTCGTGCCATAGGTGGAAGCCATTCTGTATGTCCCAGGTCCATCGCATATGGCTTTTATGTATTTACATTGATGGAACATGTGATTCTCTGGGGCTTTAAAGGTCTAAACCCCCCCCCTCTTAACTATAAAGAGTTGCCATGAAGCTTCAGGTAGCAACGGTCTCCTAGGAACCCCTCATTCACTCATGTGTTTCCTTTATTATTACGGTGCCCCCCTAATTAATTTATTATATTAAAGCAACCCTGACAGCATGGAAAAATGCATGCCGCCATTACACCTACCCGTAATAGCCCCCGGGCACCATTCCTTATTTCTTATATTAAAGGGGAACTCCACCCAAATATATTGTTTTTTTTGCACAGTGAAAGAAGACCTTGTTCTTAGGAATGACAGAAATATAATGGGGTACATTATTTTTGTATAATGCTAACTGGCGACATCACTAAGTGGCGTTTATAAGGAACGGCTCGCGGTGTTGTGCGCGGTTAGAAGATCCTTGTGGTCATGTGACTCACTGAAACTTGTATCTGATGAGAAATAATGTACCCTATTAGATAATTTAGATATTAGAGGTCATGATTGAGTTCCCTGGCACCTATGGCTCAGCCCATTGCCTTTTTAAGTCTGTTAGTTCCTCGGCTGGTTAACCCTTTGTTTTCGTTTATTTTAAAGGGCAACTTGTACCCTCAGCCACAAAGCCAAAATGCAACTGATTTCCCTTAAACTAGCAGTAGAATACAGGTATGGGATCTGTTATCCGGAAACCCGCTATCAAGAAAGCTCCGAATTATTAAAACTGATTTTCTTTTTCTCTGTAATAATAAAACAGTACCTGTACTTGATCCCAACTAAGATATAATTACCCCTTATTGGGGCAGAACAGCCCTATTGGGTTTATTTAATGGTTAAATGATTCCCTTTTCTCTGTAATAATAAAACAGTACCTGTACTTGATCCCAACTAAGATATAATTACCCCTTATTGGGGCAGAACAGCCCTATTGGGTTTATTTAATGGTTAAATGATTCCCTTTTCTCTGTAATAATAAAACAGTACCTGTACTTGATCCCAACTAAGATATAATTACCCCTTATTGGGGGCAGAACAGCCCTATTGGGTTTATTTAATGGTTAAATGATTCCCTTTTCTCTGTAATAATAAAACAGTACCTGTACTTGATCCCAACTAAGATATAATCCTTCTTGGATGAAAAACAATCCTATTGGGTTTAATTAAGATTTTATTGATTTTTTTAGTAGACTTAAGGTATGGAGATCCAAATTACAGAAAGATCCCTTATCTGGAATACCCTTGGTCCTGAGCATTCTGGATAACGGGTCCTATACCTGTATAAGCACATCATCTGTTTGCACTCAGAACATCCCGTCTCCGTATATTTGTGTTTATACATAGGGGGTGGGAGCTGCCATATTGTTTTCTTTACACCAAGGTCTCCTAACCTTGTGTTCAGGGGAACCAGATTATGTCTCAGAGAGAGAGGGTCAGAGAGCTCCGTGACCCGAGAGTTCGTTTAGAATCAATGACTGCTTTTAATGACGGCCCTTCGCTATAGGCAGACATCTCTCTAAATAAAAGGGAACCGTTGCATTGTGGGAGATGATGGGAGCTGCAGTCGGACCCACAGCGGGGGCATTCGATACACTGTGAATGGGGAATCCAATTCGTGCCCATGTTTGTGTCATTTCACGCAAAAATAAACCTTTCCTATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein	Refseq >NP_001096554\|potassium inwardly-rectifying channel, subfamily J, member 9 [Xenopus (Silurana) tropicalis] MNQDVENRINKIPKHVQGGPVVVTNRTVVMAEPPKRRRQRYVEKDGKCNVHHGNVRETYRYFTDIFTTLVDLKWRFNLLVFTMVYTITWIFFGFIWWLIAYIRGDLDHIEDSSWTPCVDKLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIVLLLVQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNQAVISVRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIICHEFNEQSPFWEISKDQLEKEEFEIVVILEGMVEATGMTCQARSSYVENEVLWGHRFMPVLTLEEGFYEVDYDTFHNTYETPTPSCSAKELAEQNAKGENVLISTGGKNKPHLENQGPEITEQKVEPLVANGDISKTKLEVPE

Genomic	tropicalis
Genome Browser	Xenbase	Xenbase JGI Ensembl UCSC

Synteny	Metazome

Expression	tropicalis	laevis
UniGene	Str.78086 [+] Str.49999 Str.58249
Unigene EST Profile	EST Profile
GEO data		GEO
Images	0 expression image(s) for tropicalis and laevis

Orthology	MOD	Entrez Gene	Genetic Phenotypes	Morphants
human	OMIM:Gene, HGNC	KCNJ9
mouse	MGI	Kcnj9	All(3) Targeted, knock Out(1) Targeted, other(2)
zebrafish

Publications
First:		Evidence that neuronal G-protein-gated inwardly rectifying K+ channels are activated by G beta gamma subunits and function as heteromultimers. [Proc Natl Acad Sci U S A 1995]
Most recent:		Functional consequences of the interactions among the neural cell adhesion molecule NCAM, the receptor tyrosine kinase TrkB, and the inwardly rectifying K+ channel KIR3.3. [J Biol Chem 2010]
		View All Papers

Functional Ontologies
GO: Molecular:		inward rectifier potassium channel activity potassium channel activity
Biological:		potassium ion transport
Cellular Component:		membrane
EC:
KOG:		[P] Inward rectifier K+ channel

Reagents	tropicalis	laevis
Clones	open biosystems
	geneservice/RZPD imagenes
Affymetrix 1.0	Str.5140.1.S1_at [+] Str.49999.1.S1_x_at Str.5140.2.A1_at StrEns.10085.1.S1_at
Affymetrix 2.0

Symbol legend[+]