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XB-GENEPAGE-
5940712
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Gene Symbol: vangl1
Gene Name: VANGL planar cell polarity protein 1 Synonyms: stb2 , van gogh Add Xenopus synonyms , Nomenclature history Gene Function: Signaling protein van gogh/strabismus Protein Function  :
Interactants: Loading ... 
OMIM Disease Associations: SACRAL DEFECT WITH ANTERIOR MENINGOCELE |
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| Xenbase Gene ID | XB-GENE-5940713 | XB-GENE-5940715 | XB-GENE-17334710 | ||||
| Gene Symbol | vangl1 | vangl1.L | vangl1.S | ||||
| Chromosome | scaffold_4168 | chr2L | chr2S | ||||
| Molecules | tropicalis | laevis.L | laevis.S | ||||
| Gene |
Genomic sequence
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Genomic sequence
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Genomic sequence
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| CDS | |||||||
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Entrez Gene
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Entrez Gene
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| mRNA |
JGI mRNA 
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Refseq
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| Protein
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JGI protein
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Refseq
TrEMBL
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TrEMBL | ||||
| Genomic | tropicalis | laevis.L | laevis.S | ||||
| Genome Browser |
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| Links | |||||||
| Genomic Synteny | Genomicus | ||||||
| Expression | tropicalis | laevis.L | laevis.S | ||||
| Ensembl | |||||||
| UniGene | Str.33478 | Xl.2505 | |||||
| RNA-Seq profile | Stage profile: |
Stage profile:
Tissue heatmap:
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| Experimental regulation |
Regulation heatmap:
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| Images | 3 expression image(s) for tropicalis and laevis | ||||||
| Data Mining | tropicalis | laevis.L | laevis.S | ||||
| XenMine | vangl1 | vangl1.L | vangl1.S | ||||
| Phenotype | tropicalis | laevis.L | laevis.S | ||||
| Smith Morpholino Screen | |||||||
| Orthology |
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| human |
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| mouse |
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| zebrafish |
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| chicken |
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| fruit fly |
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| worm |
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| Publications | |||||||
| First: | The planar cell-polarity gene stbm regulates cell behaviour and cell fate in vertebrate embryos. [Nat Cell Biol 2002] | ||||||
| Most recent: |
Models of convergent extension during morphogenesis. [Wiley Interdiscip Rev Dev Biol 2018]
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| View All Papers 3 paper(s) referencing morpholinos | |||||||
| Functional Ontologies | tropicalis | laevis.L | laevis.S | ||||
| GO | 0 term | 3 terms | 3 terms | ||||
| PANTHER | vangl1 | ||||||
| KEGG Pathways | K04510 | ||||||
| KOG |
[T] Signaling protein van gogh/strabismus
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| Reagents | tropicalis | laevis.L | laevis.S | ||||
| CRISPR / TALEN | CRISPR tools | CRISPR tools | CRISPR tools | ||||
| Clones | |||||||
| GE Dharmacon | GE Dharmacon | ||||||
| Source BioScience | Source BioScience | ||||||
| Morpholino | vangl1 MO1 , vangl1 MO2 | vangl1 MO1 , vangl1 MO2 | vangl1 MO1 , vangl1 MO2 | ||||
| ORF | vangl1 ORF1 | ||||||
| Affymetrix 1.0 | Str.33478.1.S1_a_at | Xl.2505.1.S1_at | |||||
| Affymetrix 2.0 | Xl2.2505.1.S1_at | ||||||
Symbol legend[+]
