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Summary Expression Gene Literature (3) GO Terms (11) Nucleotides (185) Proteins (34) Interactants (52) Wiki
XB-GENEPAGE-5954566
Gene Symbol:
col5a1

Gene Name:
collagen, type V, alpha 1

Synonyms:
( Add synonyms , Nomenclature history )

Gene Function:
Collagens (type IV and type XIII), and related proteins

Protein Function :



Interactants:
Loading ...

Diseases: 


Disease Ontology:
type I Ehlers-Danlos syndrome

OMIM:
EHLERS-DANLOS SYNDROME, CLASSIC TYPE, 1; EDSCL1 [+]

External Links:
 
Xenbase Gene ID XB-GENE-5954567 XB-GENE-5954572 XB-GENE-17332568
Gene Symbol col5a1 col5a1.L col5a1.S
Chromosome scaffold_19 chr8L chr8S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100038277
398739
108699914
mRNA NCBI Nucleotide NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein NCBI Protein NCBI Protein
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine col5a1 col5a1.L col5a1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards COL5A1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Col5a1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Col5a1 Ensembl
zebrafish
ZFIN, AGR col5a1 ZFIN Ensembl
chicken
GEISHA COL5A1 Ensembl
fruit fly
worm
Publications
First The Xenopus MEF2 gene family: evidence of a role for XMEF2C in larval tendon development., Dev Biol 2009                                                      
Most Recent A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors., Cell Rep 2017                            
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 11 terms 0 term 0 term
PANTHER col5a1
KEGG Pathways
KOG [W] Collagens (type IV and type XIII), and related proteins
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks col5a1
Antibodies Col1a1 Ab1 Col1a1 Ab1
Clones Horizon Source BioScience Horizon Source BioScience Horizon

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