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Summary Expression Gene Literature (13) GO Terms (6) Nucleotides (226) Proteins (18) Interactants (78) Wiki
XB-GENEPAGE- 6258021

Gene Symbol: upf1

Gene Name: UPF1 regulator of nonsense transcripts homolog

Synonyms: hupf1 , norf1 , rent1 , pnorf1
Add Xenopus synonyms , Nomenclature history


Gene Function:

Protein Function:


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-6258022 XB-GENE-17337476 XB-GENE-6255683
Gene Symbol upf1 upf1.L upf1.S
Chromosome Chr01 chr1L chr1S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq
Protein NCBI Protein Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene [+] Xl.45603 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 0 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine upf1 upf1.L upf1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards UPF1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Upf1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN upf1 ZFIN Ensembl
chicken
GEISHA UPF1 Ensembl
fruit fly
FLYBASE Upf1 Ensembl
worm
WORMBASE
Publications
First: Molecular cloning and functional characterization of nitrobenzylthioinosine (NBMPR)-sensitive (es) and NBMPR-insensitive (ei) equilibrative nucleoside transporter proteins (rENT1 and rENT2) from rat tissues. [J Biol Chem 1997]
Most recent: Method for quantitative analysis of nonsense-mediated mRNA decay at the single cell level. [Sci Rep 2015]
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 0 term 6 terms
EC
PANTHER upf1
KEGG Pathways K14326
KOG
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience
Antibody Upf1 Ab1 Upf1 Ab1
Morpholino upf1 MO1 upf1 MO1 upf1 MO1
ORF upf1 ORF1
Affymetrix 1.0 Str.24820.1.S1_at [+] Xl.10547.1.A1_at
Affymetrix 2.0 Xl2.45603.1.S1_at

Symbol legend[+]

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