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Summary Expression Gene Literature (13) GO Terms (14) Nucleotides (244) Proteins (31) Interactants (123) Wiki
XB-GENEPAGE-6258021
Gene Symbol:
upf1

Gene Name:
UPF1 regulator of nonsense transcripts homolog

Synonyms:
hupf1 , norf1 , rent1 , pnorf1 ( Add synonyms , Nomenclature history )

Gene Function:


Protein Function :



Interactants:
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Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-6258022 XB-GENE-17337476 XB-GENE-6255683
Gene Symbol upf1 upf1.L upf1.S
Chromosome Chr01 chr1L chr1S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100135270
108712392
444289
mRNA NCBI Nucleotide NCBI Nucleotide RefSeq
Protein NCBI Protein NCBI Protein RefSeq
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine upf1 upf1.L upf1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards UPF1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Upf1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Upf1 Ensembl
zebrafish
ZFIN, AGR upf1 ZFIN Ensembl
chicken
GEISHA UPF1 Ensembl
fruit fly
FLYBASE Upf1 Ensembl
worm
Publications
First Molecular cloning and functional characterization of nitrobenzylthioinosine (NBMPR)-sensitive (es) and NBMPR-insensitive (ei) equilibrative nucleoside transporter proteins (rENT1 and rENT2) from rat tissues., J Biol Chem 1997  
Most Recent Method for quantitative analysis of nonsense-mediated mRNA decay at the single cell level., Sci Rep 2015              
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 14 terms 6 terms 6 terms
PANTHER upf1
KEGG Pathways K14326 K14326
KOG
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks upf1
Antibodies Upf1 Ab1 Upf1 Ab1
Morpholinos upf1 MO1 upf1 MO1 upf1 MO1
ORFs upf1.S ORF1
Clones Horizon Horizon Horizon Source BioScience

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