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Summary Expression Gene Literature (25) GO Terms (8) Nucleotides (63) Proteins (27) Interactants (218) Wiki
XB-GENEPAGE-6540413
Gene Symbol:
mmp13

Gene Name:
matrix metallopeptidase 13

Synonyms:
clg3 , mandp1 , collagenase 3 , col3 ( Add synonyms , Nomenclature history )

Gene Function:
Gelatinase A and related matrix metalloproteases

Protein Function :


InterPro :
Pept M10A Zn BS , MetalloPept cat dom sf , Pept M10A , M10A MMP [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
spondyloepimetaphyseal dysplasia, Missouri type

OMIM:
SPONDYLOEPIMETAPHYSEAL DYSPLASIA, MISSOURI TYPE; SEMDM [+]

External Links:
1/3
 
Xenbase Gene ID XB-GENE-6540414 XB-GENE-17346804 XB-GENE-6255468
Gene Symbol mmp13 mmp13.L mmp13.S
Chromosome Chr2 chr2S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1
CDS Gene model Gene model
Entrez Gene 613098
379564
mRNA RefSeq NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine mmp13 mmp13.L mmp13.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards MMP13 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Mmp13 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Mmp13 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR mmp13a mmp13b ZFIN Ensembl
chicken
GEISHA MMP13 Ensembl
fruit fly
worm
Publications
First Spatial and temporal regulation of collagenases-3, -4, and stromelysin -3 implicates distinct functions in apoptosis and tissue remodeling during frog metamorphosis., Cell Res 1999        
Most Recent The myeloid lineage is required for the emergence of a regeneration-permissive environment following Xenopus tail amputation., Development 2020                                      
All View All Papers 1 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 8 terms 0 term 4 terms
PANTHER mmp13
KEGG Pathways K07994 K07994
KOG [OW] Gelatinase A and related matrix metalloproteases
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks mmp13
ORFs mmp13 ORF1 , mmp13 ORF2 mmp13.S ORF1
Clones Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

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