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Summary Expression Gene Literature (235) GO Terms (20) Nucleotides (91) Proteins (35) Interactants (302) Wiki
XB-GENEPAGE-853165
Gene Symbol:
vsx1

Gene Name:
visual system homeobox 1

Synonyms:
Xvsx1 , ktcn , ppcd , rinx , ppd ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :
Involved in the differentiation of bipolar cells, the last neurons of the retina to form. Together with other retinal homeobox proteins, acts as an effector of a cellular clock which, depending on cell...[+]



Interactants:
Loading ...

Diseases: 


Disease Ontology:
posterior polymorphous corneal dystrophy [+]

OMIM:
CORNEAL DYSTROPHY, POSTERIOR POLYMORPHOUS, 1; PPCD1 [+]

External Links:
1/3
 
Xenbase Gene ID XB-GENE-853166 XB-GENE-866467 XB-GENE-17337084
Gene Symbol vsx1 vsx1.L vsx1.S
Chromosome Chr5 chr5L chr5S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 100101658
779073
108717783
mRNA NCBI Nucleotide NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. RefSeq Swiss-Prot  More.. NCBI Protein
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine vsx1 vsx1.L vsx1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards VSX1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Vsx1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Vsx1 Ensembl
zebrafish
ZFIN, AGR vsx1 ZFIN Ensembl
chicken
GEISHA VSX1 Ensembl
fruit fly
FLYBASE Vsx1 Ensembl
worm
Publications
First Developmental changes in P-face and E-face particle densities of Xenopus cardiac muscle plasma membrane., Tissue Cell 1986  
Most Recent Nosip functions during vertebrate eye and cranial cartilage development., Dev Dyn 2018                  
All View All Papers 5 paper(s) referencing morpholinos 3 paper(s) referencing OMIMs 4 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 18 terms 6 terms 5 terms
PANTHER vsx1
KEGG Pathways K09335 K09335 K09335
KOG [R] Transcription factor CHX10 and related HOX domain proteins
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks vsx1
Antibodies Vsx1 Ab1 Vsx1 Ab1 Vsx1 Ab1
ORFs vsx1 ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list