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Summary Expression Gene Literature (32) GO Terms (8) Nucleotides (76) Proteins (23) Interactants (271) Wiki
XB-GENEPAGE- 853165

Gene Symbol: vsx1

Gene Name: visual system homeobox 1

Synonyms: Xvsx1 , ktcn , ppcd , rinx , ppd
Add Xenopus synonyms , Nomenclature history


Gene Function: homeodomain transcription factor

Protein Function :
Involved in the differentiation of bipolar cells, the last neurons of the retina to form. Together with other retinal homeobox proteins, acts as an effector of a cellular clock which, depending on cell...[+]


Interactants: Loading ...

Disease Ontology:
   POSTERIOR POLYMORPHOUS CORNEAL DYSTROPHY [+]

OMIM Diseases:
   CORNEAL DYSTROPHY, POSTERIOR POLYMORPHOUS, 1; PPCD1 [+]
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Xenbase Gene ID XB-GENE-853166 XB-GENE-866467 XB-GENE-17337084
Gene Symbol vsx1 vsx1.L vsx1.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq NCBI Nucleotide
Protein Refseq TrEMBL TrEMBL Refseq Swiss-Prot NCBI Protein TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus PANTHER
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.69993 Xl.12402 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 23 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine vsx1 vsx1.L vsx1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards VSX1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Vsx1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR vsx1 ZFIN Ensembl
chicken
GEISHA VSX1 Ensembl
fruit fly
FLYBASE Vsx1 Ensembl
worm
WORMBASE
Publications
First: Developmental changes in P-face and E-face particle densities of Xenopus cardiac muscle plasma membrane. [Tissue Cell 1986]
Most recent: Nosip functions during vertebrate eye and cranial cartilage development. [Dev Dyn 2018]
View All Papers 5 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs 3 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 5 terms 3 terms
PANTHER vsx1
KEGG Pathways K09335 K09335 K09335
KOG [R] Transcription factor CHX10 and related HOX domain proteins
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Antibody Vsx1 Ab1 Vsx1 Ab1 Vsx1 Ab1
ORF vsx1 ORF1 , vsx1 ORF1
Affymetrix 1.0 Xl.23560.1.S1_at [+]
Affymetrix 2.0 Xl2.23560.1.S1_at [+]

Symbol legend[+]
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