Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (23) GO Terms (26) Nucleotides (191) Proteins (43) Interactants (780) Wiki
XB-GENEPAGE-853253
Gene Symbol: prdm1

Gene Name: PR domain 1

Synonyms: blimp1 , xblimp1 ( Add synonyms , Nomenclature history )

Gene Function: transcription factor

Protein Function :

Interactants: Loading ...
Diseases:  External Disease Links: ClinVar, MalaCards, KEGG Disease, DECIPHER
1/7
 
Xenbase Gene ID XB-GENE-853254 XB-GENE-17335875 XB-GENE-853257
Gene Symbol prdm1 prdm1.L prdm1.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 493207
108716852
380265
mRNA NCBI Nucleotide NCBI Nucleotide RefSeq
Protein NCBI Protein TrEMBL NCBI Protein TrEMBL RefSeq TrEMBL TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining tropicalis laevis.L laevis.S
XenMine prdm1 prdm1.L prdm1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tgas049g17      
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards PRDM1 OMIM Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Prdm1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR prdm1a crybg2 ZFIN Ensembl
chicken
GEISHA PRDM1 Ensembl
fruit fly
worm
WORMBASE
Publications
First Gene expression screening in Xenopus identifies molecular pathways, predicts gene function and provides a global view of embryonic patterning., Mech Dev 1998                                                              
Most Recent Pituitary cell translation and secretory capacities are enhanced cell autonomously by the transcription factor Creb3l2., Nat Commun 2019                        
All View All Papers 5 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 1 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 24 terms 6 terms 7 terms
PANTHER prdm1
KEGG Pathways
KOG [K] Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks prdm1
Morpholinos prdm1 MO1 prdm1 MO1 prdm1 MO1
ORFs prdm1.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
Xenbase: The Xenopus laevis and X. tropicalis resource.
Version: 4.13.1
Major funding for Xenbase is provided by grant P41 HD064556