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Summary Expression Gene Literature (17) GO Terms (7) Nucleotides (174) Proteins (32) Interactants (652) Wiki
XB-GENEPAGE- 853253

Gene Symbol: prdm1

Gene Name: PR domain 1

Synonyms: blimp1 , xblimp1
Add Xenopus synonyms , Nomenclature history

Gene Function: transcription factor

Protein Function :


Interactants: Loading ...

Disease Ontology Associations:

OMIM Disease Associations: PR DOMAIN-CONTAINING PROTEIN 1; PRDM1
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Xenbase Gene ID XB-GENE-853254 XB-GENE-17335875 XB-GENE-853257
Gene Symbol prdm1 prdm1.L prdm1.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide NCBI Nucleotide Refseq
Protein NCBI Protein TrEMBL NCBI Protein TrEMBL Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.27139 Xl.8351 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 57 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine prdm1 prdm1.L prdm1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen tgas049g17      
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards PRDM1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Prdm1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR prdm1a prdm1b ZFIN Ensembl
chicken
GEISHA PRDM1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Gene expression screening in Xenopus identifies molecular pathways, predicts gene function and provides a global view of embryonic patterning. [Mech Dev 1998]
Most recent: Mouth development. [Wiley Interdiscip Rev Dev Biol 2017]
View All Papers 5 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 1 paper(s) referencing Disease Ontologies
Functional Ontologies tropicalis laevis.L laevis.S
GO 1 terms 6 terms 7 terms
PANTHER prdm1
KEGG Pathways
KOG [K] Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones     EXRC - 2 clone(s)
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Morpholino prdm1 MO1 prdm1 MO1 prdm1 MO1
ORF prdm1.S ORF1
Affymetrix 1.0 Str.27139.1.S1_at Xl.563.1.S1_at [+]
Affymetrix 2.0 Xl2.563.1.S2_at [+]

Symbol legend[+]
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Version: 4.9.0
Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556