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Summary Expression Gene Literature (20) GO Terms (6) Nucleotides (403) Proteins (41) Interactants (252) Wiki
XB-GENEPAGE-853954
Gene Symbol: ocln

Gene Name: occludin

Synonyms: occludin , ocln-a , ocln-b ( Add synonyms , Nomenclature history )

Gene Function: RNA polymerase II elongation factor

Protein Function :
May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier.


Interactants: Loading ...
Disease Ontology: pseudo-TORCH syndrome 1

OMIM Diseases: PSEUDO-TORCH SYNDROME 1; PTORCH1

 
Xenbase Gene ID XB-GENE-853955 XB-GENE-6253861 XB-GENE-866529
Gene Symbol ocln ocln.L ocln.S
Chromosome Chr01 chr1L chr1S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.1 Version 9.1
CDS Gene model
Entrez Gene: 548702
Entrez Gene: 108717687
Entrez Gene: 398133
mRNA RefSeq NCBI Nucleotide RefSeq
Protein RefSeq TrEMBL NCBI Protein RefSeq TrEMBL Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine ocln ocln.L ocln.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards OCLN OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Ocln MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR oclna oclnb ZFIN Ensembl
chicken
GEISHA OCLN Ensembl
fruit fly
worm
WORMBASE
Publications
First A synthetic peptide corresponding to the extracellular domain of occludin perturbs the tight junction permeability barrier., J Cell Biol 1997              
Most Recent Transcriptome profiling reveals male- and female-specific gene expression pattern and novel gene candidates for the control of sex determination and gonad development in Xenopus laevis., Dev Genes Evol 2019          
All View All Papers 2 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 0 term 4 terms
PANTHER ocln
KEGG Pathways K06088 K06088
KOG [K] RNA polymerase II elongation factor
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Horizon Horizon Horizon
Affymetrix 1.0 Str.24803.1.S1_at [+] Xl.25427.1.S1_at Xl.544.1.S1_at [+]
Affymetrix 2.0 Xl2.544.1.S1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.12.3


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