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Summary Expression Gene Literature (20) GO Terms (11) Nucleotides (424) Proteins (53) Interactants (254) Wiki
XB-GENEPAGE-853954
Gene Symbol: ocln

Gene Name: occludin

Synonyms: occludin , ocln-a , ocln-b ( Add synonyms , Nomenclature history )

Gene Function: RNA polymerase II elongation factor

Protein Function :
May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier.

InterPro : PNMA , Znf CCHC sf , Znf CCHC , Occludin ELL , ELL/occludin , Occludin , Marvel , PP2A PR55 , PP2A PR55 CS , WD40 repeat dom sf , WD40 repeat

Interactants: Loading ...
Diseases:  Disease Ontology: pseudo-TORCH syndrome 1

OMIM: PSEUDO-TORCH SYNDROME 1; PTORCH1

External Disease Links: ClinVar, MalaCards, KEGG Disease, DECIPHER
 
Xenbase Gene ID XB-GENE-853955 XB-GENE-6253861 XB-GENE-866529
Gene Symbol ocln ocln.L ocln.S
Chromosome Chr01 chr1L chr1S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 548702
108717687
398133
mRNA RefSeq NCBI Nucleotide RefSeq
Protein RefSeq TrEMBL TrEMBL NCBI Protein TrEMBL RefSeq TrEMBL Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine ocln ocln.L ocln.S
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards OCLN OMIM Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Ocln MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR oclna oclnb ZFIN Ensembl
chicken
GEISHA OCLN Ensembl
fruit fly
worm
WORMBASE
Publications
First A synthetic peptide corresponding to the extracellular domain of occludin perturbs the tight junction permeability barrier., J Cell Biol 1997              
Most Recent Transcriptome profiling reveals male- and female-specific gene expression pattern and novel gene candidates for the control of sex determination and gonad development in Xenopus laevis., Dev Genes Evol 2019          
All View All Papers 2 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 11 terms 0 term 4 terms
PANTHER ocln
KEGG Pathways K06088 K06088
KOG [K] RNA polymerase II elongation factor
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks ocln
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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