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Summary Expression Gene Literature (450) GO Terms (6) Nucleotides (2189) Proteins (35) Interactants (1892) Wiki
XB-GENEPAGE- 478944

Gene Symbol: odc1

Gene Name: ornithine decarboxylase 1

Synonyms: xODC1 , odc , ornithine decarboxylase
Add Xenopus synonyms , Nomenclature history


Gene Function: rate-limiting enzyme, polyamine biosynthesis pathway

Protein Function :


Interactants: Loading ...

Disease Ontology:
   COLORECTAL CANCER

OMIM Diseases:
   COLORECTAL CANCER; CRC
 

Xenbase Gene ID XB-GENE-478945 XB-GENE-856383 XB-GENE-17336191
Gene Symbol odc1 odc1.L odc1.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq NCBI Nucleotide
Protein Refseq TrEMBL TrEMBL Refseq TrEMBL NCBI Protein TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus PANTHER
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.11690 [+] Xl.4223 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 5 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine odc1 odc1.L odc1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards ODC1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Odc1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR odc1 ZFIN Ensembl
chicken
GEISHA ODC1 Ensembl
fruit fly
FLYBASE Odc1 Ensembl
worm
WORMBASE
Publications
First: Increased ornithine decarboxylase activity during meiotic maturation in Xenopus laevis oocytes. [Biochem Biophys Res Commun 1980]
Most recent: Reference gene identification and validation for quantitative real-time PCR studies in developing Xenopus laevis. [Sci Rep 2018]
View All Papers 154 paper(s) referencing morpholinos 8 paper(s) referencing OMIMs 10 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 2 terms 2 terms
PANTHER odc1
KEGG Pathways K01581 K01581 K01581
KOG [E] Ornithine decarboxylase
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Morpholino odc1 MO1 odc1 MO1 odc1 MO1
ORF odc1 ORF1 , odc1 ORF1 odc1.L ORF1
Affymetrix 1.0 Str.6672.1.S1_at [+] Xl.4223.1.S1_a_at [+]
Affymetrix 2.0 Xl2.4223.1.S1_a_at [+]

Symbol legend[+]
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Version: 4.9.2
Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556