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XB-GENEPAGE-
920500
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Gene Symbol: ventx1.1
Gene Name: VENT homeobox 1, gene 1 Synonyms: PV.1 , posterior-ventral 1 , Xvent-1b , ventx1.1-a , ventx1.1-b Add Xenopus synonyms , Nomenclature history Gene Function: homeodomain transcription factor Protein Function  :
Probable transcription regulator. Acts in a ventral signaling pathway downstream of bmp4 and vent2B.
Interactants: Loading ... 
Disease Ontology: OMIM Diseases: |
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| Xenbase Gene ID | XB-GENE-920501 | XB-GENE-920512 | XB-GENE-6464310 | ||||||||||
| Gene Symbol | ventx1.1 | ventx1.1.L | ventx1.1.S | ||||||||||
| Chromosome | Chr07 | chr7L | chr7S | ||||||||||
| Molecules | tropicalis | laevis.L | laevis.S | ||||||||||
| Gene |
Genomic sequence
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Genomic sequence
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Genomic sequence
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| CDS |
Gene model
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Entrez Gene
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Entrez Gene
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Entrez Gene
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| mRNA |
Refseq
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Refseq
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Refseq
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| Protein
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Refseq
TrEMBL
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Refseq
Swiss-Prot
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Refseq
Swiss-Prot
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| Genomic | tropicalis | laevis.L | laevis.S | ||||||||||
| Genome Browser |
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| Links |
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| Genomic Synteny | Genomicus | ||||||||||||
| Expression | tropicalis | laevis.L | laevis.S | ||||||||||
| Ensembl | Ensembl | ||||||||||||
| UniGene | Str.43047 [+] | Xl.1420 [+] | Xl.79762 | ||||||||||
| RNA-Seq profile | Stage profile: |
Stage profile:
Tissue heatmap:
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| Experimental regulation |
Regulation heatmap:
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| Images | 20 expression image(s) for tropicalis and laevis | ||||||||||||
| Data Mining | tropicalis | laevis.L | laevis.S | ||||||||||
| XenMine | ventx1.1 | ventx1.1.L | ventx1.1.S | ||||||||||
| Phenotype | tropicalis | laevis.L | laevis.S | ||||||||||
| Smith Morpholino Screen | |||||||||||||
| Orthology |
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| human |
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| mouse |
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| zebrafish |
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| chicken |
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| fruit fly |
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| worm |
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| Publications | |||||||||||||
| First: |
A novel homeobox gene PV.1 mediates induction of ventral mesoderm in Xenopus embryos. [Proc Natl Acad Sci U S A 1996]
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| Most recent: |
ADMP controls the size of Spemann''s organizer through a network of self-regulating expansion-restriction signals. [BMC Biol 2018]
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| View All Papers 18 paper(s) referencing morpholinos 1 paper(s) referencing Disease Ontology | |||||||||||||
| Functional Ontologies | tropicalis | laevis.L | laevis.S | ||||||||||
| GO | 3 terms | 10 terms | 8 terms | ||||||||||
| PANTHER | ventx1.1 | ||||||||||||
| KEGG Pathways | |||||||||||||
| KOG |
[K] Transcription factor tinman/NKX2-3, contains HOX domain
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| Reagents | tropicalis | laevis.L | laevis.S | ||||||||||
| CRISPR / TALEN | CRISPR tools | CRISPR tools | CRISPR tools | ||||||||||
| Clones | |||||||||||||
| GE Dharmacon | GE Dharmacon | GE Dharmacon | |||||||||||
| Source BioScience | Source BioScience | Source BioScience | |||||||||||
| Morpholino | ventx1.1 MO1 , ventx1.1 MO2 , ventx1.1 MO3 | ventx1.1 MO1 , ventx1.1 MO2 , ventx1.1 MO3 | ventx1.1 MO1 , ventx1.1 MO2 , ventx1.1 MO3 | ||||||||||
| Affymetrix 1.0 | Str.43047.1.S1_at [+] | Xl.203.1.S1_at | |||||||||||
| Affymetrix 2.0 | Xl2.203.1.S1_at [+] | ||||||||||||
Symbol legend[+]
