Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (590) GO Terms (14) Nucleotides (403) Proteins (43) Interactants (863) Wiki
XB-GENEPAGE-923210
Gene Symbol:
pou5f3.1

Gene Name:
POU class 5 homeobox 3, gene 1

Synonyms:
xoct-91 , Oct-91 , oct79 , oct92 , XLPOU91 , xoct91 , oct91 , oct4 ( Add synonyms , Nomenclature history )

Gene Function:
transcription factor containing POU and HOX domains

Protein Function :
Transcription factor that binds to the octamer motif (5'-ATTTGCAT-3'). Antagonizes the activity of nodal/activin signaling during gastrulation to suppress mesendoderm formation.


InterPro :
GIT SHD , GIT1 C , Ankyrin rpt , Ankyrin rpt-contain dom [+]

Interactants:
Loading ...

Diseases: 


External Links:
1/2
 
Xenbase Gene ID XB-GENE-923211 XB-GENE-6252587 XB-GENE-17344635
Gene Symbol pou5f3.1 pou5f3.1.L pou5f3.1.S
Chromosome Chr8 chr8L chr8S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 100498076
397784
108699884
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq RefSeq Swiss-Prot  More.. NCBI Protein NCBI Protein  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine pou5f3.1 pou5f3.1.L pou5f3.1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
Protein Atlas
mouse
rat
zebrafish
ZFIN, AGR pou5f3 ZFIN Ensembl
chicken
GEISHA Pou5f3 Ensembl
fruit fly
worm
Publications
First Sequential expression of multiple POU proteins during amphibian early development., Mol Cell Biol 1992  
Most Recent FAM46B is a prokaryotic-like cytoplasmic poly(A) polymerase essential in human embryonic stem cells., Nucleic Acids Res 2020                  
All View All Papers 11 paper(s) referencing morpholinos 2 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 9 terms 7 terms 5 terms
PANTHER pou5f3.1
KEGG Pathways K09367 K09367 K09367
KOG [K] Transcription factor OCT-1, contains POU and HOX domains
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks pou5f3.1
Antibodies Pou5f3.1 Ab1
Morpholinos pou5f3.1 MO1 , pou5f3.1 MO2 , pou5f3.1 MO3 , pou5f3.1 MO4 pou5f3.1 MO1 , pou5f3.1 MO2 , pou5f3.1 MO3 , pou5f3.1 MO4 pou5f3.1 MO1 , pou5f3.1 MO2 , pou5f3.1 MO3 , pou5f3.1 MO4
Clones Horizon Source BioScience Horizon Horizon
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list