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Summary Expression Gene Literature (31) GO Terms (17) Nucleotides (156) Proteins (38) Interactants (857) Wiki
XB-GENEPAGE-939803
Gene Symbol:
otx1

Gene Name:
orthodenticle homeobox 1

Synonyms:
xotx1 ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :



Interactants:
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Diseases: 


External Links:
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Xenbase Gene ID XB-GENE-939804 XB-GENE-939807 XB-GENE-17337096
Gene Symbol otx1 otx1.L otx1.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 394824
394326
108717621
mRNA RefSeq RefSeq NCBI Nucleotide
Protein RefSeq RefSeq NCBI Protein
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine otx1 otx1.L otx1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards OTX1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Otx1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Otx1 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR otx1 otx2a ZFIN Ensembl
chicken
GEISHA OTX1 Ensembl
fruit fly
worm
Publications
First Xotx genes in the developing brain of Xenopus laevis., Mech Dev 1996  
Most Recent Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Cell Rep 2019                            
All View All Papers 3 paper(s) referencing morpholinos 1 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 17 terms 4 terms 4 terms
PANTHER otx1
KEGG Pathways K09326 K09326 K09326
KOG [K] Homeobox transcription factor
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks otx1
Morpholinos otx1 MO1 , otx1 MO2 otx1 MO1 , otx1 MO2 otx1 MO1 , otx1 MO2
ORFs otx1 ORF1 otx1.L ORF1
Clones EXRC Horizon Source BioScience Horizon Source BioScience Horizon

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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