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Summary Expression Gene Literature (1) GO Terms (6) Nucleotides (54) Proteins (15) Interactants (35) Wiki
XB-GENEPAGE- 956999

Gene Symbol: hacd1

Gene Name: 3-hydroxyacyl-CoA dehydratase 1

Synonyms: LOC494792 , ptpla
Add Xenopus synonyms , Nomenclature history


Gene Function: Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg)

Protein Function:
Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- an...[+]


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-957000 XB-GENE-957003 XB-GENE-17339435
Gene Symbol hacd1 hacd1.L hacd1.S
Chromosome Chr06 chr6L chr6S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq NCBI Nucleotide
Protein NCBI Protein Refseq TrEMBL NCBI Protein
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.41059 Xl.11196 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 1 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine hacd1 hacd1.L hacd1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards HACD1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Hacd1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
hacd1 ZFIN Ensembl
chicken
GEISHA HACD1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Database of queryable gene expression patterns for Xenopus. [Dev Dyn 2009]
Most recent:
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 6 terms 0 term
EC
PANTHER hacd1
KEGG Pathways K10703
KOG [R] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg)
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
ORF ptpla ORF1
Affymetrix 1.0 Str.41059.1.S1_at Xl.11196.1.A1_at
Affymetrix 2.0 Xl2.11196.1.S1_at

Symbol legend[+]

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