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Summary Expression Gene Literature (24) GO Terms (15) Nucleotides (2365) Proteins (34) Interactants (160) Wiki
XB-GENEPAGE- 963456

Gene Symbol: pabpc1

Gene Name: poly(A) binding protein, cytoplasmic 1

Synonyms: pab1 , pabp , pabp1 , pabpc2 , pabpc1-a , pabpc1-b
Add Xenopus synonyms , Nomenclature history


Gene Function: Polyadenylate-binding protein (RRM superfamily)

Protein Function:
Binds the poly(A) tail of mRNA.


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-963457 XB-GENE-6255999 XB-GENE-963463
Gene Symbol pabpc1 pabpc1.L pabpc1.S
Chromosome scaffold_6 chr6L chr6S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq Refseq
Protein Refseq TrEMBL Refseq Swiss-Prot TrEMBL Refseq Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v7.1 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.48519 [+] Xl.60751 Xl.35547 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 0 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine pabpc1 pabpc1.L pabpc1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards PABPC1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Pabpc1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN ZFIN pabpc1a pabpc1b ZFIN Ensembl
chicken
GEISHA PABPC1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: The multiple RNA-binding domains of the mRNA poly(A)-binding protein have different RNA-binding activities. [Mol Cell Biol 1991]
Most recent: The RRM1 domain of the poly(A)-binding protein from Saccharomyces cerevisiae is critical to control of mRNA deadenylation. [Mol Genet Genomics 2013]
View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 3 terms 15 terms 14 terms
EC
PANTHER pabpc1
KEGG Pathways K13126 K13126 K13126
KOG [AJ] Polyadenylate-binding protein (RRM superfamily)
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience Source BioScience
Morpholino pabpc1 MO1 , pabpc1 MO2 pabpc1 MO1 , pabpc1 MO2 pabpc1 MO1 , pabpc1 MO2
ORF pabpc1 ORF2 , pabpc1 ORF3 pabpc1 ORF1
Affymetrix 1.0 Str.39190.1.A1_at [+] Xl.24862.1.S1_at Xl.8945.1.S1_at [+]
Affymetrix 2.0 Xl2.47027.1.S1_at Xl2.8945.1.S1_at [+]

Symbol legend[+]

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