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Summary Expression Gene Literature (509) GO Terms (24) Nucleotides (1113) Proteins (39) Interactants (979) Wiki
XB-GENEPAGE-966886
Gene Symbol:
rho

Gene Name:
rhodopsin

Synonyms:
rp4 , opn2 , xrho , rhodopsin , rh1 ( Add synonyms , Nomenclature history )

Gene Function:
G protein-coupled receptor

Protein Function :
Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth. Light-induced isomerization of 11-cis to all-trans retinal triggers a conf...[+]



Interactants:
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Diseases: 


Disease Ontology:
retinitis pigmentosa 4 [+]

OMIM:
FUNDUS ALBIPUNCTATUS [+]

External Links:
 
Xenbase Gene ID XB-GENE-966887 XB-GENE-966893 XB-GENE-17342665
Gene Symbol rho rho.L rho.S
Chromosome Chr4 chr4L chr4S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100037900
380209
108715858
mRNA RefSeq RefSeq NCBI Nucleotide
Protein RefSeq NCBI Protein RefSeq  More.. NCBI Protein TrEMBL
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine rho rho.L rho.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards RHO OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Rho MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Rho Ensembl
zebrafish
ZFIN, AGR rho ZFIN Ensembl
chicken
GEISHA RHO Ensembl
fruit fly
FLYBASE rho Ensembl
worm
Publications
First Formation, conversion, and utilization of isorhodopsin, rhodopsin, and porphyropsin by rod photoreceptors in the Xenopus retina., J Gen Physiol 1978  
Most Recent The regulation of skin pigmentation in response to environmental light by pineal Type II opsins and skin melanophore melatonin receptors., J Photochem Photobiol B 2020    
All View All Papers 38 paper(s) referencing morpholinos 13 paper(s) referencing OMIMs 21 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 20 terms 12 terms 7 terms
PANTHER rho
KEGG Pathways K04250 K04250 K04250
KOG [T] G protein-coupled receptor
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks rho
Antibodies Rho Ab2 , Rho Ab1 , Rho Ab3 , Rho Ab4 , Rho Ab5 , Rho Ab6 , Rho Ab7 , Rho Ab12 , Rho Ab13 , Red and Green Opsin Ab1 , Rho Ab14 Rho Ab2 , Rho Ab1 , Rho Ab3 , Rho Ab6 , Rho Ab7 , Rho Ab12 , Rho Ab13 , Red and Green Opsin Ab1 , Rho Ab14 Rho Ab7 , Rho Ab12 , Rho Ab13 , Rho Ab1 , Red and Green Opsin Ab1 , Rho Ab14
ORFs rho.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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