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Summary Expression Gene Literature (3) GO Terms (2) Nucleotides (103) Proteins (21) Interactants (110) Wiki
XB-GENEPAGE- 969519

Gene Symbol: col8a1

Gene Name: collagen, type VIII, alpha 1

Synonyms:
Add Xenopus synonyms , Nomenclature history

Gene Function:

Protein Function:


Interactants: Loading ...

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-969520 XB-GENE-17335824 XB-GENE-6488420
Gene Symbol col8a1 col8a1.L col8a1.S
Chromosome scaffold_89 chr2L chr2S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein TrEMBL NCBI Protein TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.58345 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 5 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine col8a1 col8a1.L col8a1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards COL8A1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Col8a1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN ZFIN col8a1b col8a1a ZFIN Ensembl
chicken
GEISHA COL8A1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: In silico and in vivo identification of the intermediate filament vimentin that is downregulated downstream of Brachyury during Xenopus embryogenesis. [Gene 2012]
Most recent: Evolution of the vertebrate bone matrix: an expression analysis of the network forming collagen paralogues in amphibian osteoblasts. [J Exp Zool B Mol Dev Evol 2013]
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 2 terms 2 terms
EC
PANTHER col8a1
KEGG Pathways
KOG
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience
Affymetrix 1.0 Str.31923.2.S1_at [+] Xl.12569.1.A1_at
Affymetrix 2.0 Xl2.12569.3.A1_at [+]

Symbol legend[+]

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