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Summary Expression Gene Literature (3) GO Terms (6) Nucleotides (106) Proteins (22) Interactants (112) Wiki
XB-GENEPAGE-969519

Gene Symbol: col8a1

Gene Name: collagen, type VIII, alpha 1

Synonyms: ( Add Xenopus synonyms , Nomenclature history )

Gene Function:

Protein Function :

Interactants: Loading ...
Disease Ontology:

OMIM Diseases:

 
Xenbase Gene ID XB-GENE-969520 XB-GENE-17335824 XB-GENE-6488420
Gene Symbol col8a1 col8a1.L col8a1.S
Chromosome Chr02 chr2L chr2S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein TrEMBL TrEMBL NCBI Protein TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression
Data Mining tropicalis laevis.L laevis.S
XenMine col8a1 col8a1.L col8a1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards COL8A1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Col8a1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR col8a1b col8a1a ZFIN Ensembl
chicken
GEISHA COL8A1 Ensembl
fruit fly
worm
WORMBASE
Publications
First In silico and in vivo identification of the intermediate filament vimentin that is downregulated downstream of Brachyury during Xenopus embryogenesis., Gene 2012  
Most Recent Evolution of the vertebrate bone matrix: an expression analysis of the network forming collagen paralogues in amphibian osteoblasts., J Exp Zool B Mol Dev Evol 2013  
All View All Papers 3 paper(s) referencing OMIMs 3 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 2 terms 2 terms
PANTHER col8a1
KEGG Pathways
KOG
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Affymetrix 1.0 Str.31923.2.S1_at [+] Xl.12569.1.A1_at
Affymetrix 2.0 Xl2.12569.3.A1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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