Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (29) GO Terms (13) Nucleotides (111) Proteins (38) Interactants (470) Wiki
XB-GENEPAGE-972084
Gene Symbol:
msgn1

Gene Name:
mesogenin 1

Synonyms:
MesP-related bHLH factor , Mespo , pMesogenin1 , mesogenin , mes1 , msgn1-a , msgn1-b ( Add synonyms , Nomenclature history )

Gene Function:
basic helix-loop-helix (bHLH) transcription factor

Protein Function :
Involved in specifying the paraxial, but not dorsal, mesoderm. May regulate the expression of T-box transcription factors required for mesoderm formation and differentiation, such as brachyury T, wnt8,...[+]


InterPro :
GPCR Rhodpsn 7TM , Olfact rcpt , GPCR Rhodpsn , HLH DNA-bd sf [+]

Interactants:
Loading ...

Diseases: 


External Links:
1/5
 
Xenbase Gene ID XB-GENE-972085 XB-GENE-972091 XB-GENE-6251945
Gene Symbol msgn1 msgn1.L msgn1.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 733924
399133
100216477
mRNA RefSeq RefSeq RefSeq
Protein RefSeq Swiss-Prot RefSeq Swiss-Prot RefSeq
Genomic
 tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining tropicalis laevis.L laevis.S
XenMine msgn1 msgn1.L msgn1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards MSGN1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Msgn1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Msgn1 Ensembl
zebrafish
ZFIN, AGR msgn1 ZFIN Ensembl
chicken
GEISHA MSGN1 Ensembl
fruit fly
worm
Publications
First Mespo: a novel basic helix-loop-helix gene expressed in the presomitic mesoderm and posterior tailbud of Xenopus embryos., Mech Dev 1999      
Most Recent Transcriptomics of dorso-ventral axis determination in Xenopus tropicalis., Dev Biol 2018                                      
All View All Papers 6 paper(s) referencing morpholinos 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 11 terms 6 terms 2 terms
PANTHER msgn1
KEGG Pathways K09077 K09077 K09077
KOG [K] Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks msgn1
Morpholinos msgn1 MO1 , msgn1 MO2 msgn1 MO1 , msgn1 MO2 msgn1 MO1 , msgn1 MO2
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.14.0
Major funding for Xenbase is provided by grant P41 HD064556