ube2i Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (11)

Nucleotides (429)

Interactants (26)

XB-GENEPAGE-974016

Gene Symbol: ube2i Gene Name: ubiquitin-conjugating enzyme E2I Synonyms: ubc9, ubce9 Add Xenopus synonyms Gene Function: ubiquitin-protein ligase Interactants: sumo1(7) , ranbp2(4) , sumo2(4) , pias1(3) , rangap1(3) , pias4(2) , ran(2) View All

XB-GENE-974017

XB-GENE-974023

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001016408\|Xenopus (Silurana) tropicalis ubiquitin-conjugating enzyme E2I (ube2i), mRNA AACCCTGAAATGTCTGGCATAGCCCTGAGCAGACTTGCACAGGAGAGAAAAGCGTGGAGAAAAGACCATCCTTTTGGTTTTGTGGCAGTACCAACGAAAAATCCAGATGGCACAATGAATTTGATGAACTGGGAATGTGCTATTCCAGGCAAGAAAGGGACCCCTTGGGAAGGTGGCTTATTTAAATTACGGATGCTTTTTAAGGATGATTATCCCTCCTCACCTCCTAAATGTAAATTTGAGCCACCCCTTTTTCACCCGAATGTCTATCCTTCAGGCACAGTGTGTCTGTCTATCTTAGAAGAAGATAAGGATTGGAGGCCAGCAATCACAATTAAACAGATCTTGTTAGGAATACAAGAACTTCTAAATGAACCAAATATACAAGATCCAGCTCAAGCAGAGGCATACACAATTTACTGCCAAAACAGAGTTGAATATGAAAAAAGAGTCAGAGCACAAGCCAAGAAGTTCGCGCCATCATAAACTTCAACCTTGCAGCATCTTAAAATAAAAGGAAGGGATTGGTTTGGCAAGAACTTGTTTACAAAAAAACAATTTTTTTTGCAAAAATTGAATGATGCTAAATAGAATTGAAACTCTCACTTAGGGGAGGGGGTCGTATGTGTGCCATTTTCCATTTCCGCCACTTGTATAGAGTTCTAAATTTGCTGAATATCCCCCCCAGTTTTTTCATACAGGGTCTCTTCCTTCAGTCTTTTTGTATTTTGATTGTTATGATGTAAAACTTGCTTTTATTTTAATATTGATGTCAGTATTTCAACTGCTGTAAAATGATAAAACTTTTATACTTCTATAAATTCACTAGTAATCTCTAGTTTTCCTTTGCTATCTGATGCAGGCATGCTTTCAAATGTTTAGAACTATATCTAGCCTCTAGCTGGCTGTATTAAGAACAATGTCATAAATTCCACCCCCTCCCCTACCCCAAATTTCTTTTTACGTCTTTAAGAAACTAGGTTGCACCTCAACCTAGAGCCTCAGAGATTCAATGTCAGTCAGCATCTTGCTTCTGCATCACTTCCTTTGTTTATATGGCGTTTTGTCTGTGTTGCTGTTTAGATTAAATAAACTGTTTATATAAAGTTTTTGTTTCTTTATCTTTTTCATTAAGAGGACCACAAAGCAGAAGTGTTCAGGCTTGTAAACTGACATTGTGACATTTTTATTTTTTGTGTGAAATCTGTACATATATATATATATAAAAGAACTTTTTATAACTGTTCTATTCTTGCTGCGCCGTGAAAAGGATGAGCAAAACGATTGTAGCCCTGGCATCTTGATGTAGTTGGCTAACGTACTGTTGTCTTGTAATCTGAAATGCAGATTTAAATAAAACAGTTAGCAGTAAACCAAAAAAAAAAAAAAAAAA	Refseq >NM_001087289\|Xenopus laevis ubiquitin-conjugating enzyme E2I (ube2i), mRNA CTTCAGGGGGCTTTGTCCCGAGACAAAGAGCAGTAATCGCCGCCGCGGAGCCCGCATTCTCTGGGGGTGAAGCCACCGCAGGAACCCTGAAATGTCTGGCATAGCCCTGAGCAGACTTGCACAGGAGAGAAAAGCTTGGAGAAAAGACCATCCTTTTGGTTTTGTGGCAGTACCAACGAAAAATCCAGATGGCACAATGAATTTGATGAACTGGGAATGTGCTATTCCAGGCAAGAAAGGGACCCCATGGGAAGGTGGATTATTTAAATTACGGATGCTTTTTAAGGATGATTATCCCTCCTCACCTCCTAAATGTAAATTTGAGCCACCCCTATTTCACCCGAACGTCTATCCTTCAGGCACAGTGTGTCTGTCTATCTTAGAAGAAGATAAGGATTGGAGGCCAGCAATCACAATTAAACAGATCTTGTTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGATCCAGCTCAAGCAGAGGCATACACAATTTACTGCCAAAACAGAGTTGAATATGAAAAAAGAGTCAGAGCACAAGCCAAGAAGTTTGCGCCATCATAAACTTCAACCGTGCAGCATCTTAAAAAAACAAAAAAATATAAAGGAAGGGATTGGTTTGGCAAGAACTTGTTTACACAAAACAAAAATTTTTTTTTTTTTTGCAAAAATTGATTGATGCTCCATAGAATTGAAACTGTCACTTAGGGGAGGGGGTCGTATGTGTGCCATTTTCCATTTCCGCCACTTGTATAGAGTTCTAAATTTGCTGAATATACCCCCCCCCCCCAGTTTTTTCATACAGGGTCTCTTCCTTCAGTCTTTTTGTATTTTGATTGTTATGATGTAAAACTTGCTTTTATTTTAATATTGATGTCAGTATTTCAACTGCTGTAAAATGATAAAACTTTTATACTTCTATAAACCCACTAGTAACCTCTAGTTTTTCCTTTTGCTCTCCGATGCAGGCATGCTTTTCAAATGTTTAGAACTATATCTAGCCACTAGCCGGCCGTATTAAGAACAATGTCATAAATTCCACCCCCTCCCCTCCCCGAAATTTTCTTTTTACGTCTTTAAGAAACTAGGTTGCGCTTCAACCTAGAGCCTCAGAGATTCAATGTCAGTCCGCATCTCGCTTCTGCATCACTTCCTTTTGTTTATATGGCGTTCTGTCTCTGTTGCTGTTTAGATTAAATAAACTGTTTATATAAAGTTTTTTTTTTTTTTTTTTTTCATTGAAAGGACCACAGAACAGAAGTGTTCAGGCTTGTGAACTGACATTGTGACTTTTTTTTTTTTTCCTTTTTTGTGTGAAATCTGTATATTATATATATAAAAACGACAAACTTTTTATATAACTGTTCTATTCTTGCTGCGCCGTGAAAAAAGGGGGGTGAGCATAATAATAAAAAAAACAGAAACAAAAAAAAAAAACGATTGTAGCCTGGCATCTTGATGTAGTTGGCTAACGTACTGTTGTCTTGTAATCTGAAATGCAGATTTAAATAAACAGTTAGCAGTAAACCAAAAAAAAAAAATACCCTGGTAAGTATATTGATCTTTGTTTAGAGATCCTGCTTTCGTATGAGCAATGTACTACACGAAATAATGCAAATAAAACCAGTCAATTGGAAGTGACGTTTTGTTAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001016408\|SUMO-conjugating enzyme UBC9 [Xenopus (Silurana) tropicalis] MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS UniProtKB	Refseq >NP_001080758\|SUMO-conjugating enzyme UBC9 [Xenopus laevis] MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.471 [+] Str.31155 Str.53725	Xl.175 [+] Xl.69177 Xl.69925
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	UBE2I
mouse		MGI	Ube2i	All(2) Targeted, knock Out(1) Targeted, other(1)
zebrafish		ZFIN	ube2i

Publications
First:		Role of a ubiquitin-conjugating enzyme in degradation of S- and M-phase cyclins. [Nature 1995]
Most recent:		Sumoylation controls retinal progenitor proliferation by repressing cell cycle exit in Xenopus laevis. [Dev Biol 2013]
		View All Papers

Functional Ontologies
GO: Molecular:		ubiquitin conjugating enzyme activity ubiquitin-protein ligase activity
Biological:		protein modification process ubiquitin cycle
Cellular Component:
EC:		ubiquitinprotein ligase
KOG:		[O] Ubiquitin-protein ligase (alt_id KOG:0424)

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.471.1.S1_a_at [+] Str.31155.2.S1_at Str.31155.1.A1_at Str.46265.1.A1_at	Xl.175.2.S1_at [+] Xl.175.1.S1_a_at Xl.5425.1.A1_x_at Xl.5425.1.A1_at
Affymetrix 2.0			Xl2.175.1.S1_at [+] Xl2.175.2.S1_a_at

Symbol legend[+]