tmem194a Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

My Xenbase
[Login] [Register]

Search

Summary

Gene Literature (1)

Nucleotides (135)

Interactants (10)

XB-GENEPAGE-974572

[provisional- machine annotated only] Gene Symbol: tmem194a [Predicted: Source is Human Entrez Gene] Gene Name: transmembrane protein 194A [Predicted: Source is Human Entrez Gene] Synonyms: nemp1 Add Xenopus synonyms Gene Function: Uncharacterized conserved protein Interactants: banf1(1) , crx(1) , lemd3(1) , myc(1) , otx2(1) , pax6(1) , prkra(1) View All

XB-GENE-974573

XB-GENE-6252472

XB-GENE-974580

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		Refseq >NM_001039743\|Xenopus (Silurana) tropicalis transmembrane protein 194A (tmem194a), mRNA CGGAGTCTTCACAAGTCAAAGCGATTTGTAGTTCCAGCATCTACCTTGGTGACCGCAACTTGCTTGTGTTCCAAGCCTCGATTCGGACGCACAATTCAAGTCTTGATTATGGCGGGAGAAGTGGAAGGAGAAGGCTGTAGAGTTAGTTGGGGAGTTTTGGTAGCCTTGCTGTTATTACCGCTGCCGTCATTATGTTCCCTGACCGCAGGAAAGCAACTGCAAGTGATTAAACTCTTTGAAGGAAGGGTGGTTCGGTACAATGAGTCCAAAAATTTCTGCTACCAGAGAACATATGAACCGAAATGGAGTGATGTTTGGACTAAGATCCAGATACGTGTAAACAGCACCAAAATGATAAGGGTGACCCAAGTGGAAAATGAAGAGAAACTGAAGGAAATGGAAACTTTCAACATGTTTGACTTTTTCTCATCTTTTCTCAAGGAGAAACTAAATGATTCCTTCATTTATGTCGATCTCTACAACAACAAAACTTGTATAAAAGTGCATGTATCAGACACCGACACTTACTATAGTGTTGCACTTTCCCGAGGATTTGATCCCAGGCTCTTCTTTGTGTTCTTATGTGGCCTTCTGCTTTTCTTTTATGGTGACACACTGAGCAGAAGCCAAATCTTCTACTACAGCACAGGGATCACTGTAGGGATGTTGGCTTCAATGCTAATACTTGTGTTCATGCTCTCCAAACTGATGCCGAAGAAAAGCCCCTTTGTTGCATTACTGCTTGGAGGTTGGTCAGTTTCTATTTACGTAATCCAACTGGTCTTCAAAAATTTGCAGGCAATCTGCACTGAATACTGGCAGTATCTTTTGGGGTATCTGGGTATAGTTGGATTTGTCAGTTTTGCGTTTTGTTACAAATATGGGCCCTTGGAGAATGAACGCAGCATCAACATTTTGAACTGGACACTGCAGTTGATTGGTCTGCTGCTAATGTACATCAGTGTGCAGATACGGCACATAGCAGTGACTATGGTAGTCATTGCGTTTTGTACCAAACAGATAGAATATCCAGTAAGGTGGATTTACATACTATACAGAAAAATAAAGCTGAAAAGAGGTAAGCCAAGCCCTCCCCGCCTGCTAACAGAAGAGGAATACAGAAAGCAAGGAGATGTTGAGACCAGGAAAGCTTTGGAAGAGTTACGAGGATATTGTAGTAGTCCAGATTTTGCTGCATGGAAAACTGTTTCTCGCATCCAGTCACCTAAGAGATTTGCTGATTTTGTTGAAGGCTCATCTCACCTGACACCCAATGAAGTATCTGTTCATGAGCATGAGTATGGTTTTGGTGGTTCTTTCTTAGAAGATGAATTGTTTGGAGAGGACAGTGACGTTGAGGAAGAAATGGAAATTGAACCTGTGCTTTATCAAGATCTAAGATAATGCTTATAGGATACGCCTAGCTCTCTTAATAATTCATCACCTGTGAAAAACAATGGAAATAGCCATGCCGCTAAGGCCTGTGATGGAAAGGCAGCACATGTGGTCACTGATACACTGATAATTTGGTTTGATGGCCGATGAATGTGATTCCTAAGAGACATTAATGTTATCAGTTTACTTACTACAGGGCACCTGAATGGCAAACTATCTTTTGGATGCCTGTTGGAAGCTACATAAGAAAATACAAATTCACAAGACATTTGCAGAATAACTGAGAAAAACACTGTTGGTTAATGCACAACTTAGAAAATGCAACTTCCTGTCTGGAAACTTTACCCTTACCTTTTTTTAAACCAAAGATATTGCTGATTTACAACTATTTGAAAACAAAATAATGATGGACATCTCCATCACAGCTGCTCACCCTAAGTGAAGTATATATGCAAAATGAGTGACAAACTAGTTTGTATTAAGGAACATTGTGCTGTACCACCAGCCAAATACAGCAGCCCTATGCAACCCTCCTATCTGGCTGTCTGATTCTGTCCAATCCAATGTCTGGATTAACATTTATACAAAATCACTGGACCATGGTGACTTTGCTGAACTTTATCATGGGAGAAACATGTCAGCTGCACAGTATAACTGACCTGGTGTCTGCCTACAAACTGCATGCTCATTTGAGTTCAGTTCCCTTTTCATGTTGCTTGTTTTATTTTATATTTTTTTTATAAAAGGTACCTATGTAAAAAAAAAAATCTCTATTTTTAAGTACCAATAAAAAGAGGAACACAATCCAAAAAAAAAAAAAAAAAA	Refseq >NM_001096922\|Xenopus laevis transmembrane protein 194A (tmem194a-a), mRNA GCCACTTCCGAGATAGCTGGAGAATTGAGGGAGCGAAGAGTATAGAGAGGTAGCATAGAGCGGCTGGGCGGAGTCTTCCCATTGATTTGGTGTATCTGCCTTGGTGACTGCAAGTTGCTTGCGCTCCAAGCCTCGATTTGGACGCTCGATTCAAGTCTGTATTATGGCGGGAGACGTGGAAGGAGGAGGCTGTAGAGTTAGTTGGGGAGCTCTGCTCACCTTGCTCTTATTACCGCTGCCGTCATTATGTACATTGGCCTCAGGAAAGGAACCACATGTGATTAAACTCTATGACGGTAAAGTGGTCCGGTACAATGACTCTAAAAATTTCTGCTACCAGAGAACATATGAACCAAAATGGAGTGACGTTTGGACTAAGATACAGATACGTGTAAACAGCACTAAAATGATAAGAGTGACCCAAGTGGAAAATGAAGAGAAGCTAAAGGAAATGGAAACTTTCAACATGTTTGACCTTTTCTCATCTTTTCTCAAGGAAAAACTAAATGATACATTCATATATGTGGATCTCTACAGCAACAAAACTTGTATTAAAGTGCATGTAATAGACACTGACACTTACTACAGTGTTGCACTTTCTCGAGGATTTGATCCCAGACTGTGCTTTCTGTTCTTATGTGGCCTTTTGCTATTCTTTTATGGTGACACACTGAGCAGAAGCCAACTCTTCTTCTACAGCACAGGTATCACTGTAGGTATGTTGGCTTCCATGCTGATACTTGTGTTCATGCTCTCCAAACTGATGCCAAAGAAAAGTCCATTTGTTGCATTACTGCTTGGAGGATGGTCTGTTTCCATTTACATAATCCAACTGGTCTTCAAAAATTTACAGGCTATCTGCAGTGAATACTGGCAGTATCTTTTGGGTTATCTTGGTATTGTTGGATTTGTCAGTTTTGCTTTTTGTTATAAATATGGGCCCTTGGAGAATGACCGCAGCATCAACATTTTGAACTGGACACTACAGTTGATTGGTCTGCTGCTAATGTACATCAGTGTGCAAATACAGCACATAGCTGTGACCATGGTAGTCATTGCATTTTGTACCAAACAGATAGAATATCCAGTACAATGGATTTACATACTATACAGAAAAATAAAACGTAAGAGAGCTAAGCCAAGTCCTCCCCGCCTGCTAACAGAAGAGGAATACCGAAAACAAGGAGAAATTGAAACCAGAAAAGCTTTGGAGGATTTACGAGGATATTGCAGTAGTCCAGATTTTGCAACATGGAAAATGATTTCTCGCATCCAGTCACCCAAGAGATTTGCTGATTTTGTTGAAGGGTCATCTCACCTGACACCCAATGAAGTATCTGTTCATGAGCACGAGTACGGTTTAGGGGGTTCTTTCTTGGAAGATGAATTGTTTGGAGAGGACAGTGACATTGAGGTAGAAATGGATATTGAACAGCCACTTTATCTAGTTCCAAGATCTTGCTTTTAGGATATGAAGATTTTTTTAATTCTTCACCTGTGAAAACAAGGGATAAAGCCATGCTGCTAAGGCCTGTGATCCTAATACAGCACGTGTTCCTCATAAATCACTGATCATTTGGCTTGACAATCCGTTAATCTGGTTTCTAAGAGCCATTAATGTGATCAGTGTTTAAAGGACACTTGAGTGGTAAAACTATCTTTTGAATGCCCGTCGAAAGCTACATAAAAAGATAAAAATTCACAATCGGTCACAAAATAAATGAGAACATACACAATGTAAGGTTATCTGCCCTTTAGATGGAAACAATTCCCTCGCAGTTTCTGTGCCGCCCTTTACCGCTTGTAGGTGCCTCCATCATTGATTTTTGTTTTTTAAACCAAAGATATTTCTGATGTACAACTATTTCAGAACTAGATAAAGAAGGACATCTCCATCTCAACTCCTCACCCTAAGTGAAGTATATATGCAAAATGGGTAAAGAAGATCTGGGTTGTGTTAAAGAACATGGTGCTGTCCCACCAGCCACATACAGCAGCCCTATGCAACTCCCCTGTATTTGCCCTCAAGATCTGGCTGTGACCTTCCAATCAGCAATACCATCCACATGCCTGAATCAACATTCATACAAAGCCACCAGAAGCATGTGACTTTACTGTGATTTATCATTAGAGAAGGATTTCAGCTGCACAGTGTAACTGGCCTCATGTCTCCTTACAAACTGTTTGCCAGTCGTTTGGGGTTCAGGTCCCTTTTTTCCACATAATTTGTTGGTTTATTTTTTATTTTTTTTATATAAAAAAAAAAGGTACCTATGTATAAAAAAAATCTTTATTTTTAAGTACCAATAAAACGAGGAACAAATAAAAAAAACAAAAGCGCTTTTATCTCCTGTTTTGTCATAATACTTTCAATGTAAATTAAAATGAATATTTAATCCTCTGAAAAAAAAAAAAAAA		Refseq >NM_001097755\|Xenopus laevis transmembrane protein 194A (tmem194a-b), mRNA CCCACGCGTCCGGAGGGAGCGAAGGGTATAGAGCGACAACATACTGCGGCTGGGCGGAGTCTCCCCAGCCTATACGATTTGTAGTAGTAGTATCTGCCTTGGTGACTGCAAGTTGCTTGTGTTCCAAGCCTCGATTTGGACCCTTAATTCAAGTCTTGATTATGGCGGGAGAAGTGGAAGGAAGAGGCTGCGGATTTAGTTTGGGAGTCCTGGTAACCTTGCTGGTATTACCACTGCCGTCATTATGTACCTTGAGCACAGAAAAGGAACTACATGTGATTAAACTCTATGAAGGGAGAATGGTCCGGTATAATGAGTCAAGAAATTTCTGCTACCAGAGAACATATGAACCAAAATGGAGTGATGTTTGGACTAAGATACAGATACGTATAAACAGCACTAAAATGATAAGAGTGACCCAAGTGGATAATGAAGAGAAGCTGAAGGAAATGGAAACTTTCAACATGTTTGACTTTTTCTCATCTTTTCTCAAGGAGAAACTGAATGATACATTCATATATGTGAATCTCTACAGCAACAAAACTTGTGTCAAAGTGCATTTAACAGACACCGACACTTACTACAGTGTTGCACTTTCTCGAGGATTTGATCCAAGACTCTTCTTTGTTTTCTTATGCGGTCTTCTACTATTCTTTTATGGTGACACTCTGAGCAGAAGCCAACTCTTTTTCTATAGCACAGGAATCACTGTAGGAATGTTGGCTTCAATGCTGATACTTGTGTTCATGCTCTCCAAACTGATGCCAAAGAAAAGTCCATTTTTTGCGTTACTGCTTGGAGGATGGTCCGTCTCTATTTACGTAATCCAACTGGTCTTCAGAAATTTACAGGCAATCTGCAGTGAGTACTGGCAGTATCTTATTGTGTATCTGGGTATTGTTGGATTTGTCAGCTTTGCTTTTTGTTATATATATGGGCCCTTGGAGAATGAACGCAGCATCAACATTTTGAACTGGACACTACAGTTAATTGGTCTGCTGCTAATGTACGTCAGTGTGCAAATACAGCACATAGCAGTGACTATAGTAGTCATTGCATTTTGTACCAAACAGATAGAATATCCAGTACAGTGGATTTACATACTATACAGAAAAATAAAACTAAAGAGAGCTAAGCCGGGCCCACCCCGCTTGCTAACAGAAGAAGAATACAGAAAACAAGCAGATGTTGAGACCAGGAAAGCTTTGGAGGAATTACGAGAATGTTGCAGTAGTCCAGATTTTGCAGCATGGAAAACGATTTCTCGCATCCAGTCACCCAAGAGATTTGCTGATTTTGTTGAAGGCTCATCTCACCTGACACCCAATGAAGTATCCGTTCATGAGCACGAGTATGGTTTAGGTGGTTCTTTCTTAGAAGATGAATTGTTTGGAGAGGACAGCGATGTTGAGGAAGAAATGGAAATTGAACCGCCACTTTATCCAATTCCAAGATCTGTCTTTTAGGATTTGCCTAGCTCTCTTTAATTCTTCACCTGTGAAGACAAAGGAAAAAGCCATGCCACTAAGGCCTATGATCATAAGACAGCACATATAGTCCTCATAAATCACTGATCATTTGGTTTGACAAGCGGTTCATCTGGTTCCTAAGAAATCAGTGTTTACTTACTACAGGGCACGCCTGTCGAAAGCTACATAAGAAAATAAAACAAATCATTATCACCCACAAAATAAAATATTTTCCATTCATATAATGTAACTCTATCTGTGCTTTGGATGGAAACATCTCCATCACTATTAGTGCAGCCCTTTACCACTTGCAGGTGCCTCCAACAGTATTTTTTTTTTAACCAAAGATATTGCTGATTTACAACGAATTGAAAACTAAATTAAAGAAGGACATCTCCATCAAAACTCCTCAACATAAGTGAAGTATATATGCAACATGAGTAAAGAAGAACTAGTTTGTGTTGAGGAACATGGTGCTTTCCTACCAGCCACATACAGCAGCCCTATGCAACTCCCCTGTATTTGCCCTCAAGATCTGGCTTTGTGATCATCTCCAACCAGCAATGCCATGCACACGCCTGGATCAACATTCATACAAAGTCACTGGAAGCATTTGACCATGACTTCACAGAATTTTACCATGGGAGAAGGAGTTCAGCTGAACAGTGTAACTGACCTGTCGGCCTGATGTCTACTTACAAACTGTTTGCCAGCTGAGTGGGGTTCAGGTCTCTTTTTCACTTCCCCTGTTGTTTTATTTTTTTTATATACAAAAGGTACCTGTGTTAAAAAAATATATATATTTTTTCAGTACCAATAAAAAGAGGAACAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001034832\|transmembrane protein 194A [Xenopus (Silurana) tropicalis] MAGEVEGEGCRVSWGVLVALLLLPLPSLCSLTAGKQLQVIKLFEGRVVRYNESKNFCYQRTYEPKWSDVWTKIQIRVNSTKMIRVTQVENEEKLKEMETFNMFDFFSSFLKEKLNDSFIYVDLYNNKTCIKVHVSDTDTYYSVALSRGFDPRLFFVFLCGLLLFFYGDTLSRSQIFYYSTGITVGMLASMLILVFMLSKLMPKKSPFVALLLGGWSVSIYVIQLVFKNLQAICTEYWQYLLGYLGIVGFVSFAFCYKYGPLENERSINILNWTLQLIGLLLMYISVQIRHIAVTMVVIAFCTKQIEYPVRWIYILYRKIKLKRGKPSPPRLLTEEEYRKQGDVETRKALEELRGYCSSPDFAAWKTVSRIQSPKRFADFVEGSSHLTPNEVSVHEHEYGFGGSFLEDELFGEDSDVEEEMEIEPVLYQDLR UniProtKB	Refseq >NP_001090391\|transmembrane protein 194A precursor [Xenopus laevis] MAGDVEGGGCRVSWGALLTLLLLPLPSLCTLASGKEPHVIKLYDGKVVRYNDSKNFCYQRTYEPKWSDVWTKIQIRVNSTKMIRVTQVENEEKLKEMETFNMFDLFSSFLKEKLNDTFIYVDLYSNKTCIKVHVIDTDTYYSVALSRGFDPRLCFLFLCGLLLFFYGDTLSRSQLFFYSTGITVGMLASMLILVFMLSKLMPKKSPFVALLLGGWSVSIYIIQLVFKNLQAICSEYWQYLLGYLGIVGFVSFAFCYKYGPLENDRSINILNWTLQLIGLLLMYISVQIQHIAVTMVVIAFCTKQIEYPVQWIYILYRKIKRKRAKPSPPRLLTEEEYRKQGEIETRKALEDLRGYCSSPDFATWKMISRIQSPKRFADFVEGSSHLTPNEVSVHEHEYGLGGSFLEDELFGEDSDIEVEMDIEQPLYLVPRSCF		Refseq >NP_001091224\|transmembrane protein 194A [Xenopus laevis] MAGEVEGRGCGFSLGVLVTLLVLPLPSLCTLSTEKELHVIKLYEGRMVRYNESRNFCYQRTYEPKWSDVWTKIQIRINSTKMIRVTQVDNEEKLKEMETFNMFDFFSSFLKEKLNDTFIYVNLYSNKTCVKVHLTDTDTYYSVALSRGFDPRLFFVFLCGLLLFFYGDTLSRSQLFFYSTGITVGMLASMLILVFMLSKLMPKKSPFFALLLGGWSVSIYVIQLVFRNLQAICSEYWQYLIVYLGIVGFVSFAFCYIYGPLENERSINILNWTLQLIGLLLMYVSVQIQHIAVTIVVIAFCTKQIEYPVQWIYILYRKIKLKRAKPGPPRLLTEEEYRKQADVETRKALEELRECCSSPDFAAWKTISRIQSPKRFADFVEGSSHLTPNEVSVHEHEYGLGGSFLEDELFGEDSDVEEEMEIEPPLYPIPRSVF UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis a		laevis b
UniGene		Str.3173 [+] Str.73805	Xl.59813		Xl.4285
Unigene EST Profile		EST Profile	EST Profile		EST Profile
GEO data			GEO		GEO
Images		1 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human			TMEM194A
mouse
zebrafish		ZFIN	tmem194a	1 Lines(s)

Publications
First:		Involvement of an inner nuclear membrane protein, Nemp1, in Xenopus neural development through an interaction with the chromatin protein BAF. [Dev Biol 2009]
Most recent:
		View All Papers

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:		[S] Uncharacterized conserved protein (alt_id KOG:3817)

Reagents		tropicalis	laevis a		laevis b
Clones		open biosystems	open biosystems		open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes		geneservice/RZPD imagenes
Affymetrix 1.0		Str.44632.1.A1_at [+] Str.3173.1.S1_at	Xl.4285.1.A1_at		Xl.6369.1.A1_at
Affymetrix 2.0			Xl2Affx.135.1.S1_at [+] Xl2.4285.1.A1_s_at Xl2.4285.2.S1_s_at		Xl2.6369.1.A1_at [+] Xl2.6369.2.S1_at

Symbol legend[+]