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Summary Expression Gene Literature (8) GO Terms (9) Nucleotides (190) Proteins (42) Interactants (210) Wiki
XB-GENEPAGE-976043
Gene Symbol:
cldn5

Gene Name:
claudin 5 (transmembrane protein deleted in velocardiofacial syndrome)

Synonyms:
claudin-5 ( Add synonyms , Nomenclature history )

Gene Function:
integral membrane protein, tight junction component

Protein Function :
Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity.



Interactants:
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Diseases: 


External Links:
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Xenbase Gene ID XB-GENE-976044 XB-GENE-6078354 XB-GENE-17332561
Gene Symbol cldn5 cldn5.L cldn5.S
Chromosome Chr1 chr1L chr1S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 448343
398929
444247
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine cldn5 cldn5.L cldn5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC, AGR, Monarch, OMIM, GeneCards CLDN5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Cldn5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Cldn5 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR cldn5b cldn5a ZFIN Ensembl
chicken
GEISHA CLDN5 Ensembl
fruit fly
Publications
First Genomic profiling of mixer and Sox17beta targets during Xenopus endoderm development., Dev Dyn 2006                          
Most Recent Gon4l regulates notochord boundary formation and cell polarity underlying axis extension by repressing adhesion genes., Nat Commun 2018                  
All View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 9 terms 4 terms 4 terms
PANTHER cldn5
KEGG Pathways K06087 K06087 K06087
KOG
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks cldn5
Antibodies Cldn5 Ab1 Cldn5 Ab1
Morpholinos cldn5 MO1 , cldn5 MO2 cldn5 MO3
ORFs cldn5.L ORF1 cldn5.S ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

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